CI01000030_06560646_06561937


Basic Information

Item Value
gene id CI01000030_06560646_06561937
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 6559844 ~ 6561937 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_06560646_06561937.mRNA
ATGCAGTTTGGCTCAGGATAGAGCTTCGCACGGGTGTCACATTAAAAAAGGGTTCATTTTGCTGCTCACATTGACATTCTTATTGTCTGCCATTAATTACTTCTCTGATTTTTCTCTCAAGTCCACTGTGCCTCCTCACACCTTGTATAAAAATGTGGTAAATCGGATACGCTCCTATTACATGGGTATTGATTTTTCTTCTGGCCGTGATAACCAAACAATATTTTTAGCACCTCCACCTGCACCCAAAGCTAATCAACAAGTCCAACAAACAACTACACAAATGCCTACACAAACCACAGACATTTCAGTACATTATCACATAGCTCATCCAAGCAACTATCATTTCATTCTGGATGAACCTGATAAGTGTAAGCAGAATCCGTTCCTGGTCTTGATGGTCCCTGTGGCACCCAATCAGGTAGCAGCTCGTAACGCCATCCGGAGCACGTGGGGGAATGAGAGCACAGTCCAGGGAAAAGCAGTGATTACTCTGTTCCTGGTGGCTTTGACTGGAGGATCCGACTCTGAAAAAGCTCAACAGCAGCTGGAGGAAGAGAGCCGACAACACAGAGACTTACTGCAGAGCAACTTTGTGGACTCGTACTTTAACCTGACTATAAAGACGATGGTAATCATGGACTGGCTGGCCACTCGTTGCCCTCAAGCAAATTTCAGTATGAAGGTTGATTCTGACATGTACTTAAACCTGGAAAACCTGATGACCCTTCTATTGGCACCCGACACACCCAGACAGAACTACATCACTGGAGTGGAGCTGTACCCCGAACCGAAATACCCCACGTACCTGCTGGGAATGGGATATGTTTTCTCCAATGACCTGCCAGAAAAAATAGTTGAGGCTTCCAAGGTCATAAAGGCCTTCAATATAGAAGACGCATATGTTGGTGCTTGTCTGAAACAGTTGGGCATTGCACCCTCATCCCCCCCAAACCCTTCACAGTTTAAAATCTACATGGGACAATATAAACGAGAGAATTTTTTTGGGGTCATTACAACAATATTGGGATCCCCACAGCAGCTAATAGACATCTGGAAGGACGTAAAGAGGCCCACATAAAAGGAATCAAATCTGAGTGTTTATTGGTTGCCTGAATTTTAAAGGACTATTTGCATGAAGTAAATAGTTATTTATAAATGTATATTTTAACTTATTTTTTCCTTTTAGATTGTTATATATATATATATATATAGACATGCATCATACATACATACATATATATATATATGATGTATGATGTATGTCTATGTGTGTGTGTGCATGTGTATCACACACACATAAAATAATTTAAATTATTATTTCAAGAGACACACATTCTAGAATATTCCATATGTTGCATATAAAATGGCATCCAGGTACAAAATTGTGTTTACAGTAGTGTACTTCCTTATAACAGAGGCTGTCATTCTGATTTTACATTTCAATTCATTGAAGTATAAAATAATTTTGTAAAAATGTTGTCAATTTTTTGTGGTATCTGTGAATGTTTCTTATGTTTCATACAAGACTTATTTGTAACTGAATCTCAATTTATTTTATTAGACTTTAATTTTTTATGGTTGACTATAAATATTTAGAATACAATTTTTAAAATAAATGTTTCAAATAAAATAACAATACTGATGTCACTATTTAGGACCATCTGCCAGTCCACAAATCACACAGCAACATACGGCGACAAAAAAAGTTAATCTTATTTGATGGTTGTTGCTTTCAGTACTTTAAAACTCGATTGTTGACAAGGTCGCATTGGAACCTTCAGCTTGTATTTTGCATGTCATGCAAATAACGTTGGTAAGGTGAGATAGCAGCTTCCAGACTATTATAATGCCATAGATCTTCAAGACATTTAGACATTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_06560646_06561937.mRNA True 1883 mRNA 0.38 2 6559844 6561937

Neighbor

gene id symbol gene type direction distance location
CI01000030_06558263_06559216 NA coding downstream 360 6558075 ~ 6559484 (-)
CI01000030_06532783_06533802 NA coding downstream 24738 6532744 ~ 6535106 (-)
CI01000030_06453382_06458615 NA coding downstream 101229 6453231 ~ 6458615 (-)
CI01000030_06447375_06451108 SDE2 coding downstream 108637 6447054 ~ 6451207 (-)
CI01000030_06442356_06446395 MORG1, WDR83 coding downstream 113449 6442356 ~ 6446395 (-)
CI01000030_06570135_06578090 GLIS2A coding upstream 8085 6570022 ~ 6578090 (-)
CI01000030_06602837_06605662 NA coding upstream 40137 6602074 ~ 6605692 (-)
CI01000030_06645888_06646573 NA coding upstream 83865 6645802 ~ 6647456 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 coding upstream 139150 6701055 ~ 6704745 (-)
CI01000030_06705681_06711246 GDE1 coding upstream 143487 6705424 ~ 6711246 (-)
G161522 NA non-coding downstream 5345 6551771 ~ 6554499 (-)
G161399 NA non-coding downstream 305105 6248834 ~ 6254739 (-)
G161395 NA non-coding downstream 313826 6245801 ~ 6246018 (-)
G161394 NA non-coding downstream 315144 6244454 ~ 6244700 (-)
G161393 NA non-coding downstream 321239 6238317 ~ 6238605 (-)
G161519 NA non-coding upstream 32432 6594369 ~ 6599857 (-)
CI01000030_06841490_06848643 NA non-coding upstream 279488 6841072 ~ 6848659 (-)
G163043 NA non-coding upstream 305148 6867085 ~ 6867895 (-)
G163053 NA non-coding upstream 338007 6899944 ~ 6900921 (-)
G163070 NA non-coding upstream 382208 6944145 ~ 6944501 (-)
CI01000030_06131710_06138371 NA other downstream 421438 6131090 ~ 6138406 (-)
G160949 NA other downstream 759418 5797297 ~ 5800426 (-)
G160712 NA other downstream 1047770 5456960 ~ 5512074 (-)
G160713 NA other downstream 1136331 5419119 ~ 5423513 (-)
G160213 NA other downstream 3090682 3466353 ~ 3469162 (-)
CI01000030_06747047_06752255 NA other upstream 181321 6746960 ~ 6752411 (-)
G163065 NA other upstream 362546 6924483 ~ 6925657 (-)
G163139 NA other upstream 587537 7149474 ~ 7150144 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other upstream 1173499 7735436 ~ 7737720 (-)

Expression


Co-expression Network