CI01000030_06532783_06533802


Basic Information

Item Value
gene id CI01000030_06532783_06533802
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 6532744 ~ 6535106 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_06532783_06533802.mRNA
AGTAAAGGTTATAGGTGTCCTAATTTGCATGAAATGCTTGAAAAATTGTGTTTTGAGGCTGATGTGAACAATTTTTATAAAAGAAGAAGAAAATGAACCTGTGGGTGTGTTCAGTACTCGCTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTGCGCGCACTTGGATGGGTGAAATGCAGAGCACAAATTCTATGTCACATCATTTTCACTTTCTTTCACATAAAGCAACAAAGATGGCTAAAGTGAGATTTTAGTTTTTAGTAGTTTAGTAATAGACCTACCGATCTCTATGTAAAAATAATGATGCTGCCATCTTTATAAAGTGATTTTTACACCCCCATTTTTACACAAAATAGTGGATTACTATATTTAAACAGAAAAAATATTAACAAAATCAAAAATTTGAGCTGGGGAAGTTTCCGAAATTTGGTTGATTTGACATGGAATAACCCTGTATGAGAAAATGTCCCACTTTTCCTGTATTTAACATACATACCTTATTTGGAGCAGCACCATGGCAGGTATGAAAGGCTGTGAGGGATAGACTTAGCGGTGTAAAAAGTTGTGTAAAGCTGTATAAATTTCCTAGATCACTTATAATTTTCCACAGCTCACATTGTCTGGAGTTTTTTCTCAACTGAAATTTCTTGGAAATATATTTTTGGAGTGTTTTGTCTGCAGAACAATCCAAAAACAAATTAACAGTACAACCCACTGAAGAGATGTATGTCTATCCTTCACAGCCTCGCTTTCATTCACATTTAAATTCAAAGATGGCACTGCTGTGAATAAGGTCTATGTCGTCATACTCGAAACCTTGAGTTTTTAATGAGAGGCATTGAATTTCAGCCATCATCTCACATGCAGGAGTAAGTTTACTGCTTAACACCTGGCAGTCTTATGTCTACCTTCAGAAGATAAAGTTTCGGGGTGTGACGCCTGCAGACCCTCATGACTGTGTGTCAAGGTCAGTTAGTTTCTTAAAATATCAGATAATTTGACTTTTTTTATGACAAGGCAAGGTTAGTTCAGGTTGTAAAATATCATGTGGCACTTCCCCAAAACGCAATGGTATGTATGAATTCTAATGATATTTGCAACAAATACTTTTTTTCATTTTAAAATGTGGACACTCATGTATTCAAGGTGCAATATGCAAATAACTTGTTTCTTTTTACTTGATGGTTACGCCACATGACATTTTCGAGTCATTAAATTTAACTTTTATTTCATTAAATGTTAAAGCTGTCATTGACCCAGTCTCTTTTTGTGCTCTTTCAGCAGTGCCTCGTTCACACAGATGTCCTGTAAGAAGTGGTTACTGGTTTGTCTCCTGGTTTCAGGAGTTTTTTTAGCACTCTATCTCACTTATAGTCCTATGACAAAGTGGTTCCAAGTGGAGAAAGAACCACAAAGGTACCCTGTTGCGAAAAGACCAAGTACAGAAGCACCAACTGAGGAACCTTTTCAGGAAGAACCAGGGATGTACCATGTTGCTTACCCCAGAAAATACAAATTCATCATTGATCAGCCAGAGATATGTGAACAACAAAAGCCCTATTTGGTGGTTATTGTCCCTGTGCCCCCTTGGGATGTTGATGCACGCAATGGCATCAGGAAAACGTGGGGTGAACAAAAGGTTTTTGGCGACAAAATGGTGCTGGTTCTGTTTCTTTTGGGCTTACACAGTGGAAACGATGAAGAAATGTTGCAGGAGCGACTCCGGAATGAGAGCCAACAATACCAAGACCTTCTGCAGAGCAACTTTCAGGATTCCTACAGGAATCTGACCATTAAAACTATGGTGATGATGGAATGGCTCAGCAGAAAGTGTCAACAGGCAACCTACGCGATGAAAGTGGACGCTGATGTGCTGCTCAACATGAACAACCTAATAAAAATGCTTGTGAGTCTGAACACAGTACAAGGCAACTATATGACTGGGTTAGTGTGGTATGAAAGCCCTGTCATACGAGACCCATCCAGCAAGTTTTTCCTGCCATATGATGTGTACTCCAAAAACACATATCCTCCATATCCTTTGGGCATGTGTTACATTATTTCTGTGGACCTCCCACAAAAGTTCCTACAGGAATCAAAGCAAATTAAGCCCATATATATTGAGGATGCATATCTTGGAATATGTTTGGAGCGTTTGGGTATCGTCCCTATCAAACCACCAAATATCGAACAGTTTGTGGTGAAACCACCGCAGTACAATCGTTGTTACTATTCTGGACTGATAGCAGTACTTACAGAAAACACAAATCAGATGACTTCTTATTGGTTAGATATTCATTCATCCAGCCAACCATGCTGAGGTGGAAACATCCCAACTAAAAGAATATTCCTCAATAAA

Function

NR:

description
Beta-1,3-galactosyltransferase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_06532783_06533802.mRNA True 2363 mRNA 0.39 1 6532744 6535106

Neighbor

gene id symbol gene type direction distance location
CI01000030_06453382_06458615 NA coding downstream 74129 6453231 ~ 6458615 (-)
CI01000030_06447375_06451108 SDE2 coding downstream 81537 6447054 ~ 6451207 (-)
CI01000030_06442356_06446395 MORG1, WDR83 coding downstream 86349 6442356 ~ 6446395 (-)
CI01000030_06430857_06435176 CCDC130 coding downstream 97568 6430762 ~ 6435176 (-)
CI01000030_06405632_06428709 NA coding downstream 104035 6405568 ~ 6428709 (-)
CI01000030_06558263_06559216 NA coding upstream 22969 6558075 ~ 6559484 (-)
CI01000030_06560646_06561937 NA coding upstream 24738 6559844 ~ 6561937 (-)
CI01000030_06570135_06578090 GLIS2A coding upstream 34916 6570022 ~ 6578090 (-)
CI01000030_06602837_06605662 NA coding upstream 66968 6602074 ~ 6605692 (-)
CI01000030_06645888_06646573 NA coding upstream 110696 6645802 ~ 6647456 (-)
G161399 NA non-coding downstream 278005 6248834 ~ 6254739 (-)
G161395 NA non-coding downstream 286726 6245801 ~ 6246018 (-)
G161394 NA non-coding downstream 288044 6244454 ~ 6244700 (-)
G161393 NA non-coding downstream 294139 6238317 ~ 6238605 (-)
G161385 NA non-coding downstream 311808 6219908 ~ 6220936 (-)
G161522 NA non-coding upstream 16665 6551771 ~ 6554499 (-)
G161519 NA non-coding upstream 59263 6594369 ~ 6599857 (-)
CI01000030_06841490_06848643 NA non-coding upstream 306319 6841072 ~ 6848659 (-)
G163043 NA non-coding upstream 331979 6867085 ~ 6867895 (-)
G163053 NA non-coding upstream 364838 6899944 ~ 6900921 (-)
CI01000030_06131710_06138371 NA other downstream 394338 6131090 ~ 6138406 (-)
G160949 NA other downstream 732318 5797297 ~ 5800426 (-)
G160712 NA other downstream 1020670 5456960 ~ 5512074 (-)
G160713 NA other downstream 1109231 5419119 ~ 5423513 (-)
G160213 NA other downstream 3063582 3466353 ~ 3469162 (-)
CI01000030_06701334_06704398 MGC53794, FAM195A, FAM195A.S, MCRIP2 other upstream 165949 6701055 ~ 6704745 (-)
CI01000030_06747047_06752255 NA other upstream 208152 6746960 ~ 6752411 (-)
G163065 NA other upstream 389377 6924483 ~ 6925657 (-)
G163139 NA other upstream 614368 7149474 ~ 7150144 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other upstream 1200330 7735436 ~ 7737720 (-)

Expression


Co-expression Network