CI01000030_07842295_07842928


Basic Information

Item Value
gene id CI01000030_07842295_07842928
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7842036 ~ 7842928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_07842295_07842928.mRNA
ATATAAAAGAGTGCCAACAACAATACGCTCTGGACACAGTTGCCTTTTTCTGTGGGAAACAGAGAGCTTTCAGAACAGGAACTCAAAGAGGAAATACCTTCTTGCCATCATTTCCCGTTTTGCTACAAGCAAACCTAAGACGACAAAAGATTTGTCTAGTGAACACGATGAATACAATATAACTGAATCTCTTGTTTACACACTAATGGATGGCAAACATTTCTAATTTTTACCCCATAATCTGTCCAAAAGAAAAGGCATGAAGGAATTGGGTAAACCTCCTCAAAGAAAAACTGTGGATGTTGAACTCATTGGTCCCATACTAGCCATCTTATTTGTGACCTCCATCATTGTGCTCATCATCTGCTGGGTCTGTCCCTCCTGCTGTCTCCATAAAAGGTTCAGAAGTCCTAGACCTGTGACTGCGACAACTACAGTCGTGACGACACAATTCCTTCCGCAGCCGGACGTTCAGGGCAGCCGGTACCTTCCTTACCAGCCTTTGCCAAATAACCCACCTTACGGAGGCCAACCCATGCCAATCGGACCTTTTAAGGGACAACCATATCAGGAGGCTGGTCCAGCGTATCCTGTTCCCTTCAGCCAGGCTCCAAATGACGGTGGTCAGGCCATGTTCCCTATACAACCAGCTCAACCACTACTGCCCACAGACTACACCTCACCTCAACCTGCGTACAACCCCGCTTATGTGGATTTACCGG

Function

NR:

description
Si:dkey-42i9.6 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_07842295_07842928.mRNA True 722 mRNA 0.47 3 7842036 7842928

Neighbor

gene id symbol gene type direction distance location
CI01000030_07829863_07839971 BAP1 coding upstream 1162 7829863 ~ 7840874 (+)
CI01000030_07804997_07807303 NA coding upstream 34120 7804662 ~ 7807916 (+)
CI01000030_07759509_07760589 NA coding upstream 81154 7758805 ~ 7760882 (+)
CI01000030_07738356_07746377 SASS6 coding upstream 95590 7738356 ~ 7746446 (+)
CI01000030_07722943_07724722 TIMM13.L, TIMM13, TIMM13.S coding upstream 117038 7722694 ~ 7725017 (+)
CI01000030_07868597_07886123 NA coding downstream 25364 7868292 ~ 7886228 (+)
CI01000030_07899071_07899829 NA coding downstream 56143 7899071 ~ 7900320 (+)
CI01000030_07903607_07912664 IPPK coding downstream 60679 7903607 ~ 7913309 (+)
CI01000030_07924704_07945878 ECM2, OMD coding downstream 81776 7924704 ~ 7945939 (+)
CI01000030_07954583_07955459 NA coding downstream 111655 7954583 ~ 7956474 (+)
G161937 NA non-coding upstream 37496 7804286 ~ 7804540 (+)
G161936 NA non-coding upstream 37930 7803825 ~ 7804106 (+)
G161935 NA non-coding upstream 38557 7802938 ~ 7803479 (+)
G161913 NA non-coding upstream 40117 7801434 ~ 7801919 (+)
G161933 NA non-coding upstream 42008 7799801 ~ 7800028 (+)
G161949 NA non-coding downstream 2564 7845492 ~ 7845741 (+)
G161950 NA non-coding downstream 3268 7846196 ~ 7846757 (+)
G161953 NA non-coding downstream 12699 7855627 ~ 7858263 (+)
G161954 NA non-coding downstream 16986 7859914 ~ 7873188 (+)
G161956 NA non-coding downstream 18254 7861182 ~ 7861688 (+)
CI01000030_07200104_07202258 GCGA other upstream 639551 7200104 ~ 7202485 (+)
G159816 NA other upstream 3324929 4516778 ~ 4517381 (+)
G159685 NA other upstream 3353510 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 4798263 3018776 ~ 3043773 (+)
G158416 NA other upstream 5227743 2595876 ~ 2614293 (+)
G162088 NA other downstream 395037 8237965 ~ 8239604 (+)
G161986 NA other downstream 701654 8544582 ~ 8548325 (+)
G162137 NA other downstream 725082 8568010 ~ 8571726 (+)
G162449 NA other downstream 1513475 9356403 ~ 9357014 (+)

Expression


Co-expression Network