G161933


Basic Information

Item Value
gene id G161933
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7799801 ~ 7800028 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU183843
TTTTGACTTTTTTTATCTCATAATTATGACTATATTCTCAAAATTTTAACTTTTTGTCAATTTTGTCATAATTTTTATCTCATAATTATGATTTAGTATGTCATAATTTCGACTTTTTATCTCATAATTATGACTTTCTGTCATAATTTCAATTTTCTATTTTAGAATGCTTTTTTTTGTCATAATTATGACTTTTTAAAATCATAATTTCGACTTTTTATATCATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183843 True 228 lncRNA 0.19 1 7799801 7800028

Neighbor

gene id symbol gene type direction distance location
CI01000030_07759509_07760589 NA coding upstream 38919 7758805 ~ 7760882 (+)
CI01000030_07738356_07746377 SASS6 coding upstream 53355 7738356 ~ 7746446 (+)
CI01000030_07722943_07724722 TIMM13.L, TIMM13, TIMM13.S coding upstream 74803 7722694 ~ 7725017 (+)
CI01000030_07673227_07694020 ARHGEF18, ARHGEF18B coding upstream 105781 7673227 ~ 7694020 (+)
CI01000030_07601044_07646747 INSR, INSRB, INSRA coding upstream 151936 7601044 ~ 7647865 (+)
CI01000030_07804997_07807303 NA coding downstream 4634 7804662 ~ 7807916 (+)
CI01000030_07829863_07839971 BAP1 coding downstream 29835 7829863 ~ 7840874 (+)
CI01000030_07842295_07842928 NA coding downstream 42008 7842036 ~ 7842928 (+)
CI01000030_07868597_07886123 NA coding downstream 68264 7868292 ~ 7886228 (+)
CI01000030_07899071_07899829 NA coding downstream 99043 7899071 ~ 7900320 (+)
G161932 NA non-coding upstream 302 7799297 ~ 7799499 (+)
G161931 NA non-coding upstream 896 7798641 ~ 7798905 (+)
G161930 NA non-coding upstream 1342 7797750 ~ 7798459 (+)
G161929 NA non-coding upstream 11436 7788108 ~ 7788365 (+)
G161928 NA non-coding upstream 11722 7787878 ~ 7788079 (+)
G161913 NA non-coding downstream 1406 7801434 ~ 7801919 (+)
G161935 NA non-coding downstream 2910 7802938 ~ 7803479 (+)
G161936 NA non-coding downstream 3797 7803825 ~ 7804106 (+)
G161937 NA non-coding downstream 4258 7804286 ~ 7804540 (+)
G161949 NA non-coding downstream 45464 7845492 ~ 7845741 (+)
CI01000030_07200104_07202258 GCGA other upstream 597316 7200104 ~ 7202485 (+)
G159816 NA other upstream 3282694 4516778 ~ 4517381 (+)
G159685 NA other upstream 3311275 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 4756028 3018776 ~ 3043773 (+)
G158416 NA other upstream 5185508 2595876 ~ 2614293 (+)
G162088 NA other downstream 437937 8237965 ~ 8239604 (+)
G161986 NA other downstream 744554 8544582 ~ 8548325 (+)
G162137 NA other downstream 767982 8568010 ~ 8571726 (+)
G162449 NA other downstream 1556375 9356403 ~ 9357014 (+)

Expression


Co-expression Network