G161928


Basic Information

Item Value
gene id G161928
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7787878 ~ 7788079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU183838
GTTAGCAACCACTGTTTTTAAGACACAATAAAGGTCTAAAAAAATCACAAGTGGGTTATAACTGGTGTGTTTTATGTCATAGATCAAAACGTGAAAATATTTAGAGGCTTTGTTAACCACAGACCTTATTTAAGGCGATTTAGTAAAATCCCATTCAGAAAACCCATTGACTTCGGGGCGATGGAACCGGAAGTCCTAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU183838 True 202 lncRNA 0.36 1 7787878 7788079

Neighbor

gene id symbol gene type direction distance location
CI01000030_07759509_07760589 NA coding upstream 26996 7758805 ~ 7760882 (+)
CI01000030_07738356_07746377 SASS6 coding upstream 41432 7738356 ~ 7746446 (+)
CI01000030_07722943_07724722 TIMM13.L, TIMM13, TIMM13.S coding upstream 62880 7722694 ~ 7725017 (+)
CI01000030_07673227_07694020 ARHGEF18, ARHGEF18B coding upstream 93858 7673227 ~ 7694020 (+)
CI01000030_07601044_07646747 INSR, INSRB, INSRA coding upstream 140013 7601044 ~ 7647865 (+)
CI01000030_07804997_07807303 NA coding downstream 16583 7804662 ~ 7807916 (+)
CI01000030_07829863_07839971 BAP1 coding downstream 41784 7829863 ~ 7840874 (+)
CI01000030_07842295_07842928 NA coding downstream 53957 7842036 ~ 7842928 (+)
CI01000030_07868597_07886123 NA coding downstream 80213 7868292 ~ 7886228 (+)
CI01000030_07899071_07899829 NA coding downstream 110992 7899071 ~ 7900320 (+)
G161926 NA non-coding upstream 2671 7785004 ~ 7785207 (+)
G161924 NA non-coding upstream 4324 7783297 ~ 7783554 (+)
G161895 NA non-coding upstream 55779 7731819 ~ 7732099 (+)
G161894 NA non-coding upstream 56377 7731116 ~ 7731501 (+)
G161929 NA non-coding downstream 29 7788108 ~ 7788365 (+)
G161930 NA non-coding downstream 9671 7797750 ~ 7798459 (+)
G161931 NA non-coding downstream 10562 7798641 ~ 7798905 (+)
G161932 NA non-coding downstream 11218 7799297 ~ 7799499 (+)
G161933 NA non-coding downstream 11722 7799801 ~ 7800028 (+)
CI01000030_07200104_07202258 GCGA other upstream 585393 7200104 ~ 7202485 (+)
G159816 NA other upstream 3270771 4516778 ~ 4517381 (+)
G159685 NA other upstream 3299352 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 4744105 3018776 ~ 3043773 (+)
G158416 NA other upstream 5173585 2595876 ~ 2614293 (+)
G162088 NA other downstream 449886 8237965 ~ 8239604 (+)
G161986 NA other downstream 756503 8544582 ~ 8548325 (+)
G162137 NA other downstream 779931 8568010 ~ 8571726 (+)
G162449 NA other downstream 1568324 9356403 ~ 9357014 (+)

Expression


Co-expression Network