CI01000030_10732075_10737200


Basic Information

Item Value
gene id CI01000030_10732075_10737200
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10731349 ~ 10737535 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10732075_10737200.mRNA
ATTTACTACTATACAAACAAATGTAACCATTATGAGAACTTGAAGTTCAGTCACATTTAGACACTAGTAATGTAAAATATATGGAAATGTCAGCAATTTTGACATATACACTGTAACATGGTTGCCTGCCATAACCAATAATAAGAATATGTTATACCACCAATTCTAAATTCGTAATAAGGACTAGAATAAGTTTAACACGCAAGTAGAACAAACATAATCACATTAAGTGTGTGAGCACGGGGAGGGTGGTGGAAATGTGTCAGGGGGGAAATCACACTTGGTGACATTTCAGGTGATGTTCTCTCAGACCGTACAGCCAACTGCTGATAAAAATGCTTCACGGGTTTGTTTTCTTTTGTTTGTGCTTCTGGCGTCTCGTCGGTGTGTTTGGTGTTGAGGCAGATGAAATCGAGTCGGTGTCAGTGCTGGAGGGTGATTCTCTCACCCTACCGACTGGTGTGAATAAAATACAAGAGGACGATCTGATAATGTGGACGTGCGGTGACTATTGTATCGCTAAACTCAACATATCCTCCCAAGTCATCTCTGAAACTAACAACAGATTCAGAGACAGACTGCAGCTGGACATTCAGACTGGATCTCTGACCATCACAAACATCAGAACCACAGACTCTGGACTTTATAAAGCACAGATGATTGGACATAAAGTTTCAAAGAAAACTTTCAGCGTTACTGTCATTGCTCGTCTTCCCATTCCTGTCATCAGTAGTTACTGTCCTCAAAGTCCTTCTTCACCATCAGCGTCCAGATGTGTGCTGCTGTGTTCAGTGGTGAATGTGGGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGCGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGTTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCGGTGAACTCTGTCAGCCATGTTCAGAATGTGTCAACTGTTGTGGTTCTACTGAAGCTGTGATCCAATTGGTCCTCTCTGCTCTGGTGGGCGTGGCTACTGTTGTTGTTCTGGTTTATGACTTCACATCCAGAAGAGCTGAACAGGAAAACAGAGCTCCGAAATCAAACTGATTTACTATAACAAGAATTTTAAAAGAATATCATCAGTAAAACATTTTTCTCTCTATTTTTTATGTTTTGCATAATATTGGGAGAAATCATTTAAATACTCTATAAATGCCCTCTAAAACAACATGGCACGCAGCTCATGAGTCTTGTGCATTCATATTTTCACTTCGCAATCATCTTTTCTTTCATCTACGCTATATGCTTACTAAACATTTTCTTCTGTTTTTGTGGTCTGGTAAAGTAGGTAGCAGACCTGTTTCTGTGGCCTGTTAGCATGAAAGCGTTTCTCAGGAAGTGTTTAGTTTTGCAAACTTGTGACTTCTGAAGAACCTGTCCTTTAGTGTCAGGACATTGCCCCTTTAATGTTGTTACCCACAGTGTTCAGAAAGTTTTCTCAGTTAAGCTACGGGTGTTAAACGTTGAACTTTACACACATTACACACCTTTGTTTGAGAAACAAGTTTACTTTTTAAGCCACCCTCAGTAAAACTCTTGTCTGGTAGATTGAGTCCTGTTCTTTTACTGAAACCTTGCTTATTATTACATTATATACAGTACATTCCTGGCGTGACACTTTCTCCAGTGCACTTGACTTGTTCTTTCAACACAATTGATGCACCATTACAGTACAAGTAATAGTGGTAAGTGCCTATGAAATTATGGAATTATGTGTTTGTCACTGAGAGACTTATTTTAATAATGCCATTTAATGTTTTCCTTTGTATTAAA

Function

NR:

description
hypothetical protein cypCar_00011838

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10732075_10737200.mRNA True 1871 mRNA 0.40 4 10731349 10737535

Neighbor

gene id symbol gene type direction distance location
CI01000030_10705288_10715416 NA coding downstream 15764 10704934 ~ 10715585 (-)
CI01000030_10654923_10662255 NA coding downstream 68081 10654916 ~ 10663268 (-)
CI01000030_10635543_10640525 NA coding downstream 90741 10635417 ~ 10640608 (-)
CI01000030_10592588_10595113 NA coding downstream 136047 10591754 ~ 10595302 (-)
CI01000030_10577987_10580431 NA coding downstream 150623 10577944 ~ 10580726 (-)
CI01000030_10771736_10772503 NA coding upstream 34008 10771543 ~ 10772780 (-)
CI01000030_10797691_10834282 MYO9B coding upstream 59923 10797458 ~ 10836927 (-)
CI01000030_10865700_10868055 NA coding upstream 127729 10865264 ~ 10869004 (-)
CI01000030_10886966_10901232 NA coding upstream 149059 10886594 ~ 10904464 (-)
CI01000030_10919162_10925437 NA coding upstream 181511 10919046 ~ 10925437 (-)
G163644 NA non-coding downstream 59323 10670248 ~ 10672026 (-)
G163648 NA non-coding downstream 101525 10626507 ~ 10629824 (-)
G164289 NA non-coding downstream 165553 10534515 ~ 10565796 (-)
G164285 NA non-coding downstream 214265 10516854 ~ 10517084 (-)
G164284 NA non-coding downstream 214669 10516448 ~ 10516680 (-)
G164333 NA non-coding upstream 9574 10747109 ~ 10756128 (-)
G164347 NA non-coding upstream 48194 10785729 ~ 10786207 (-)
G164348 NA non-coding upstream 51225 10788760 ~ 10788980 (-)
G163699 NA non-coding upstream 57495 10795030 ~ 10796442 (-)
G164353 NA non-coding upstream 119730 10857265 ~ 10857551 (-)
CI01000030_10343879_10366274 NA other downstream 364994 10343865 ~ 10366508 (-)
CI01000030_10103451_10131419 NA other downstream 609629 10102944 ~ 10133765 (-)
G164071 NA other downstream 1255085 9475188 ~ 9476264 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 756803 11494183 ~ 11495854 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020093 si:ch73-256j6.2 coding NC_007133.7 CM002906.2 5532003 ~ 5568610 (+)