CI01000030_10103451_10131419


Basic Information

Item Value
gene id CI01000030_10103451_10131419
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10102944 ~ 10133765 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10103451_10131419.mRNA
ACAGGTTGCAGTCTGTAGTCAGGGGAAGTAAAAGCCGTGGCCTTTATTATGATGTACCTTCACAGAGTCCAAGTGAATGCAGTCAGGCTTAATCTTGGTGTTAGATTAATTTTCAGGTAGACTATCTGCAGATCTCGAAGATATCAGTCGTCAGTTGGAAACAGGCGTCTCAACCTCTGTGATGTGTGGCAGCAGCGGCGCGAGATCCCGGGAGAATGATGAAGCAGACACAGAGACAGTGTAATACAATAACATTCTCAAGATTATTAAGTAAGAAGGGTCATATTTATACACAAGATAAAGCAGAATATCCACATCCACGATGTCCAGGCCATCCAATCATAGAACTCAGAGGTCAAACTTTACCATATATAGTATATTAAGAAATATAATAACGAGTTGTTTAATGTTCAAATGTATGTGCGTGTCTAGAGTTCCCGTTTGCTTGTGAGTGTATAAGTGTGTCCAAGGCCTGGTCTATGATGTGCACATAACAACGAAAAGAAGTTACACATGGGCAGTCTTGCACAAGAACAGTCAGGAAGAAAATATTAACACTTAGTATCAGAACACTAGCTTTAAAATGTCCTCAGGCTATAAACTCTTAAGCACTTGCACATCAAAATGCAGTGAGTTTGCAGTGAGCAGCAATTCGTTTGTGTGACATGTGAAGAGAGTTTCAGAGTGATATACTTCTCTGATGAAGATGAAGAGATAATAACCAAACAGTAGAAATAATTTAATCATTTTCTCAGCAACAGGCAACACTACTGCTGCAGTGAAAGCTTCAGAGAACTGCTGGAAGAAAATAACAAAATGTGTCATTACCAAAGTGAATTAATATTGACCCATAACAAGGGTATACGAGAACAAATTTGATTATACCTTGATTATATCATTATATCCTGAGTGTTGTTTGATTTTGGTAGTCTTGCTATTGGAGATAATTTGTAAATTTGTTATGCCTGTATTTTCTAATATATTATGACATGAACGGTGACGGTGACGGGACATAAAAAAACAGCCACGGTGCAGCTGTGTCTTTCCTTTGGCGGAGTTCGCTCTGCCGTCTCAGCCGGTGCAACTGTACTTTTGGTATACTAAACTGGTATACTTAAAGGTGGGGTAAGCCATATTTCAAAAACGCTGTTGGACTCAAACAAACCCACCCTTCTCTTCATTGCTCCGCCTCCAAAACTCACCCTCCAATCCTAACCACGATGCCACTGTATAGCTAATAACTTTTGGTTCACAACATGGTTTCATAATTTTTCAGTATATGTGATTGTCAGGAGTATCACATGGTCAGTAGCACAATATTCAAATGAATTTATAACAAACCAGACTTCTGATCAGTGAATCAGTCCACTTCACGATGACATTAATTAACAGCCAACATCATGTGATGTTATTCTGTCATGACTTCTTCTAAGTAAACTTGTTTTCTGAACACACTAACAAAGCAGGCAGAAAAATAAATAAAACAAGAGTCAAGAGCCCAACTTCAGGAAACACTGATCACCACAATGGTGACTTCAAATCTCTGTTCCTCTTTCCTTCAGCGTGTCTTCACTAATGTTCAATCGTCACTTAATTATCAAATAAACTTCAGCACTGCTTATTTTAACTCTGTAGTGTGACACACATGAACACTGAGTGCTGTGAAACATGGGATTTTGCTGTGTATCATCCAACCTAAAGCCATTTTTAAGCCAAAAAGTTACTGATCCTTAATATTTAAAGGGCATGTTGTTTAAAGTATGTTTTTTGCCAACATTATGAAAACATTTTTATTTTTTTTTTAAATATACAAACAATGTATAAATAATGTGTTTGTGCTAAACTTTTGAGAACATTATTAAAGACCAGATAACATTAAATAATGTTCCTTTAACGGTTAATGAGAATTATGAGAATGTTCCCTGTTAACTTGGAAAGTGGTAGTTTTGTGGACTATCAATGGAGAGACAGAAATCTCTCTGATTCATCCGTGTTTTAAACATGAACAAAAGTTGTACGGGTTTGGAACAGCATGAGGGTGAGTAAATGATGACAGAATTTTCATTTTTGGTTTAACTATCCCTAGAACATAACTTTCTCTGGAGCAGGTTATGTTTAGAGAGTAAATTGCTAAGTTTTCCCACATACTCTGAGTAAAAATACCCATGTTGCATAACATGTTTTCTGGGCATGTTATCTGGGTATACGTCAGCAAAACAAGCAGGTACAGACACAACTAGTCATAAACCGCTTTCAGTTTCAGAAGAACACAATTTTACTTGTGCATTTACATGGACAAAAGCTTTTATTTCCACAGATTCAGCGTTCTGTGACTATTGTACAATGATGGTCTTTATTTTGCTCTTAGTGTGTGTGTTAGTGGCTGGTGTTTCTGGTGTTAGTATACATGAAGTGATTCTGGGAGAGGGAGATTCACTCACTCTACACACTGGTGTTACAACAGACCAACAAGAAGAGATTATATGGTTTTTTGAAGACACTCTCATCGCTGAAATCACTGGAGATCAGAGTAAGATCTTTACAGATGTTCAGTGTAAAGAGAGATTCAGAGACAGACTGAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCAGAAACACAGACTCGGGAGATTATCAAATACAGTTTAACAGCAGAGGTGACATTGAAAAGATCTTCAAAGTTATTGTCTTGGGTGTTTCTGCTGTACAACAAATTAAGATAATAGAGGGAGGATCTGTCACTTTAGATGCTGGAATAATGACACAAAATGAAATGGTAACTTGGTATTTTAATGACACTATCATTGCTCTAGTCACTGGAGATCTCAGTTTGATCTGTACAGATGTTCAGTGTAAAGATAGTAATGAGAGATTCAGAGACAGACTGAAGCTGGATTATTGGTTTACAAGGTCTCTGACCATCACAAACATCAGTACCACAGACTCTGGACTCTATAAACTAAAGATCATCAAGAGCAGTTTGACCATCATGAGGAGCGTCACTGTTACTGTCACTGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTTTTCATCATCATCACCATGTTCATTGTTGTGTTCATCTGTGAATGGGCGTCATGTGACTCTCACCTGGTACAAAGGAAACAGTTTTTTGTCCAGCATCCGTGTGTCTGATCTCAGCATCAATCTCTCTCTACCTCTGGAGTTGGAATATCAGGATAAAAACACCTACAGCTGTGTGTCGAGCAATCCAATCAGCAACCAGACAAGACATTTCAACATCACTCAACTCTGTCACACATGTTCAGGAAGCCACGCCCACTGTTGTGATTCTGTGCTTCGATTGGTCATCACTGCGCTGATGGGTGTTTCTGGTGTTAGTATACATGAAGTGATTCTGGTAAAAGGAGATTCACTCACTCTAAACACTGGTGTTACAACAGACCAACAAGAGGAGATTAGATGGTTTTTTAAAGACACTCTCATTGCTGAAATCATTGGACATCTCAGTTACAACTGTACAGATGTTCAGTGTAATGAAGGTACTGAGAGATTCAGAGACAGACTAAAGCTGGATCATCAGACTGGATCTCTGACCATCACAAACATCGAAAACTCAGACTCTGGAGAATATCAAATACAGTTTAACAGCAGCAGCGACAGTGAAAAGATCTTCAAGGTTATTGTCTGGGGTATTTCTGCTAGAAAAGAAATGAAGATCACAGAGGGAGAATCTGTCACTTTAGAAGCTGGAAAAATGACACCAAATGATATGGTAACTTGGTATTTTAATGACACTCCCATCGCTCTAGTCACTGGAGATCTCAGTAAGATCTGTGCAGATGTTCAGTGTAAAGATAGTAATGAGAGATACAGAGACAGACTGAGGCTGAGTTATCAGTTTACATGGTCTCTGACCATCACAAACGTCAGTACCACAGACTCTGGACTCTATAACCTAAAGATCATCAAGAGCAATTTCACCATCATGAGGAGCGTCACTGTTACTGTCACTGGAGTCGATGTAGTTGTAGTTGATAACCAGCAAATGCAGGCATATGTGATCAACATCTGCAAGAGCAGCACCACAGAGAAAAATAAAACAATAGAGAGGGAGATGCAGATAGCAAAGGAAGCAGCAAAATAAAGTTGCTAGTGAAATTAGTGCATTAGTGTTGAAATGTATATCTAGATTATTCAATAATAGCTTAAAAGTATGTTAGAGACACATAGATTTCAGCCATTATGAATTAATTATATGTTTTTAATAATATTTATGACATAAACATACAAAGATTTTTCAAGTTCATTTCCTTGTTTCAGAAAAGAAAACAGTGTTTATGTGGATTTTACTTCAAGGCACTTTTTTCTCTTGGCTGGTGTAAAGTTAATGAACACAGAAGGGAAAGGTCTAAACATATTCTGCCAAGAGTACAAGAAACTTAATATTTGTCATACTAACAGCATATAAAAAAAATTAAAAAAACAAAAAAAAATCTTCAGCATTAGGAAAACTACAACATTCATGCTTCTTATTCATTTATGATCAAATCTATGGTAAAGACTTTTGAGAGGCATTTAGCATATTGGCTTTGACACATTTATCTTGATTTTTATCTTGGGTTTGACACTTGATTTATTTGACATAAATAAA

Function

NR:

description
novel protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10103451_10131419.mRNA False 4662 mRNA 0.37 8 10102944 10133765

Neighbor

gene id symbol gene type direction distance location
CI01000030_10078771_10093451 NA coding downstream 9225 10078553 ~ 10093719 (-)
CI01000030_10071261_10074291 NA coding downstream 28285 10071118 ~ 10074659 (-)
CI01000030_10053291_10057146 NA coding downstream 45447 10053102 ~ 10057497 (-)
CI01000030_10021914_10024391 NA coding downstream 77703 10020983 ~ 10025241 (-)
CI01000030_10016398_10019434 NA coding downstream 82928 10016209 ~ 10020016 (-)
CI01000030_10154139_10158476 NA coding upstream 19939 10153704 ~ 10158732 (-)
CI01000030_10172789_10173932 NA coding upstream 38972 10172737 ~ 10173996 (-)
CI01000030_10189939_10194778 NA coding upstream 56012 10189777 ~ 10194938 (-)
CI01000030_10227153_10232109 NA coding upstream 93309 10227074 ~ 10232636 (-)
CI01000030_10280046_10287211 NA coding upstream 146213 10279978 ~ 10287250 (-)
G164188 NA non-coding downstream 76089 10026224 ~ 10026855 (-)
G164167 NA non-coding downstream 121542 9919610 ~ 9981402 (-)
G164165 NA non-coding downstream 193782 9908672 ~ 9909162 (-)
G163813 NA non-coding upstream 50259 10184024 ~ 10186590 (-)
G163739 NA non-coding upstream 66831 10200596 ~ 10202474 (-)
G164224 NA non-coding upstream 69890 10203655 ~ 10210809 (-)
G164232 NA non-coding upstream 88682 10222447 ~ 10224888 (-)
G164071 NA other downstream 626680 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 800795 9276431 ~ 9294802 (-)
G163873 NA other downstream 1168962 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1910458 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 2310562 7788797 ~ 7792198 (-)
CI01000030_10343879_10366274 NA other upstream 231652 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1360573 11494183 ~ 11495854 (-)

Expression


Co-expression Network