CI01000030_10071261_10074291


Basic Information

Item Value
gene id CI01000030_10071261_10074291
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10071118 ~ 10074659 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10071261_10074291.mRNA
ACTAGCTCGATTTTACCATTAAGTGTATTTCATCCAATACTCAGACAACATTCTTCTACTTTTACATATTTGTCACACTCACGTAACTGGCTTTTAAAAGTTATCAGTGTGAAATTATAAAAATTAATGTTTTTCATAATGTTTTTGTTTTAAGAACAGTTAAATTCTCACTAACAGAAAGAAGAACATTTCGATATATAAATTTATGACATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTATTAGGAGGGTCAGACTCTGTTGGGGGAAGATTCACGCGCAACATTACTTCTGTTGTGTTTCTTTAGCTCAGTTGTGTTTTCATTGATAGTATTATTAGATCAGGCGTTTCTCTGAACAGCTGAAAATGTTTTGCATGCTTTTTTTGTTCTGTTTGTGCTGCTGGAGTCTGATCGGTGTGTTTGATGCTAAAACAAATGAAAAACAGTCAGTGATGGAGGGAGATTCTGTCACTCTAAACACTGATCTTACTGAAATACAGAAAGATGAAGATATACAGTGGAAATACGGAGATGAAAAGTCTCTCATCGCTAAAATCAGCATTGAGAAGGAAATCTTCTCCACATATGATGATGTTCCTGATAAGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCAGAACTGAACATGCTGGAGTTTATAAACTAGAGATAAATGGAAAGAAACTGACATCAAAAACATTCAGTGTTTCTGTTTATGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCAAATTGTTCATTAGTGTGTTCAGGTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGAAACCAGACTCAACATCTGGACATCACTCAACTCTGTCATACATGTGCAGGTCAGACTCATGAGGACGAGATCACTTACTCTGATCCAGTGTTCTACAAAAGAAACGCACGTAAATCAAAAGTTGAAGAGGAGTATCATGTGGATTATGCACCTATCAAAATGAGAAGATGATCGAAGATGTTTTTCTAAGTAAAGACCCAGCTGTGACACGGAGTCTGAGACTATGGTTGAGTTTTTCATGAGAATCACCACACTGTTTCAGGAAATCCCAGCAGACATCGAGCAGGATCAATGTTTAAACTATAATAATTAAA

Function

NR:

description
hypothetical protein cypCar_00037883

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10071261_10074291.mRNA True 1306 mRNA 0.38 5 10071118 10074659

Neighbor

gene id symbol gene type direction distance location
CI01000030_10053291_10057146 NA coding downstream 13621 10053102 ~ 10057497 (-)
CI01000030_10021914_10024391 NA coding downstream 45877 10020983 ~ 10025241 (-)
CI01000030_10016398_10019434 NA coding downstream 51102 10016209 ~ 10020016 (-)
CI01000030_09978185_09986181 NA coding downstream 84684 9978001 ~ 9986434 (-)
CI01000030_09974111_09976354 NA coding downstream 94466 9974028 ~ 9976652 (-)
CI01000030_10078771_10093451 NA coding upstream 3894 10078553 ~ 10093719 (-)
CI01000030_10103451_10131419 NA coding upstream 28285 10102944 ~ 10133765 (-)
CI01000030_10154139_10158476 NA coding upstream 79045 10153704 ~ 10158732 (-)
CI01000030_10172789_10173932 NA coding upstream 98078 10172737 ~ 10173996 (-)
CI01000030_10189939_10194778 NA coding upstream 115118 10189777 ~ 10194938 (-)
G164188 NA non-coding downstream 44263 10026224 ~ 10026855 (-)
G164167 NA non-coding downstream 89716 9919610 ~ 9981402 (-)
G164165 NA non-coding downstream 161956 9908672 ~ 9909162 (-)
G163684 NA non-coding downstream 265237 9733712 ~ 9805881 (-)
G163743 NA non-coding upstream 32935 10107594 ~ 10403831 (-)
G163813 NA non-coding upstream 109365 10184024 ~ 10186590 (-)
G163739 NA non-coding upstream 125937 10200596 ~ 10202474 (-)
G164224 NA non-coding upstream 128996 10203655 ~ 10210809 (-)
G164071 NA other downstream 594854 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 768969 9276431 ~ 9294802 (-)
G163873 NA other downstream 1137136 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1878632 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 2278736 7788797 ~ 7792198 (-)
CI01000030_10343879_10366274 NA other upstream 290758 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1419679 11494183 ~ 11495854 (-)

Expression


Co-expression Network