CI01000030_09277337_09294501


Basic Information

Item Value
gene id CI01000030_09277337_09294501
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9276431 ~ 9294802 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09277337_09294501.mRNA
AGACTGCAGCAAGACTGATTTTAAGCTACTTCCTGAGTCAGTAATATTGCCTGTCAAACAAAGTTATATTCTCTAATAATTATAGTGTAATTAGGAACTTGAGTCTGGCCTACTGGTAGAGAAGAAGAAGAGAATCCAAGAGCAGAGTCTATTGTTTATCAATGATTTTTTGATGGCTAAGAATCCAGCTGTTTTACATGCATCAGTTTTGATGGATTGATTCAGTACTTTATTACACTAGAAAGCAGTTTTATTAGAGGTAAAGTCAGACGCAATCAGGGCAGGAAGAAGCTCTTCACAAATGGCCACATTCCTGCACAAGATGTTTGTCCATCCAGCAGATCAAAGATTGTTTTTGAAGAAAACAGACCGCAGCAGGTTTCAGTTTGACTCGATAGATAAGCTGATAGAGTTATACGTCAGTGTGTTTGGTGATGAAGTGAAGTCAGTGTCAGTGATGGAGGGAGAATCGGTCCTTCTACACTCTGATGTCACTGAAATACATAAAGACGACAACATACTGTGGAAATTTGGAACTGAAAACTCTATCATAGCTAAAATCAATAGAGCGAAACACATTTCCTCCACATATAATGGTCCTGATGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACACCAGAACCACAGACTCTGGACTCTATAAACTAGATATATTTGGAGCTAAACTTTCATCAAAAACATTCAATGTTTCTGTCTATGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTCAACAATTCATACACCAACCAGACGAGACATCTCAACATTAATCAACTCTGTCACACATGTGCAGCCGTTACAGCACTGGCCCCACAGACTGTTTCACAGACTCCTTCAGTTCTTCCAGTCTCTCTGATAGTGCTGATCTCTGTTTTTGGATCTCTGTTGATTGTAGCTGTAGTCGGGATCTTTTGCATCTACAGGAAATGCAGAAAAACAGTTCAGACAAAGGAGGAAGACAGAACTGATCCAGCATTGAGTAAACCAACAACACTAAAAGAGTCATTTGAGAGACTGGTGCTGGCCTACCTGAAGGACATCACTGGACCTTTGCTGGACCCCCTGCAGTTTGCTTATCAACAAACAGGTGTGTTTGGTGAGTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTTTATACACTGATCTTACTGAAATACGTGAAGATGAAGACATACTGTGGAAATATGGAGCTGAAAACTCTCTCATAGCTGAAATCAGTAGAGCTGCGGGAATCTTCTCTACATCTAACAGTCCTGATGAGAGATTCAGAGACAGACTGAAGCTGGATGATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATAAACTACTGATAAGTGGAGCGAAACGATCATCAAAAACATTCAGTGTTTCTGTCTATGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCATCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGACACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGGTCCACTTGACCTGTCATCTGTCAAATCATGCAGCACTCCTAGACAGGTGCATAATCTCTGTGAATACACTGCTGTAGTCAGTCAAGCGACTGACCGCTGTTTTAATGTGCAAAGGAATGTGCACAAAGGACCACGGGCAAAACCAGTTGAGAACCACTGATATAGAAGATGTTTGATGTTGTTTCCTGAAGCTGCTTTATGTTAGCTTGGCCGTAGAAGGGAGATTTTTTTTTTTTTTTTTAATACAACAGTGCTGATTAATGTTATTAGGGAAAAAGCTATAGGCCTATATCACATTACATCTAAATCTTCAGATTGAACCTGTCAGATGTTTTTTATGCTTTTTTTTATAGAAAGTGAAAGAGGAGGATCATGTGGATTATGCACCTCTCAACATGAGAAGATGATCAAACTTCAATGTTTTTATAAGTACAAGATACAACTGTTTAATCACTTTCACCAGGAACCTCCTTTCATGTTTCATCTGAAAGTAAGGAAGCCCGTAAAGGGTGATGGTTAAAAATTTGAGCTGGGAGGGGGGGAAATTACTATTACCTTGTCTGTATTAAAGAGACCATGTATAAATCTCATGTAAAAAGTACAAAACATAGATGTAAAAAACTCATCTAAAGGAGTGGAGACCCTGCTTTATTCATTTATTTACATCTAAACAGATATTGCTCTGTTGGACATTGTTCATGAGAATGTAACTACTGCTGAAGGTTTGTTTGATGTCAGTTTTTGCGTGTGAAGAGTGTGGTTGAAGGGTTTTTTCCATTGCTGCTCACACAAACCGTTTGACTTCTGCTCTACAAAACAAAAACACTTTACTACAAAATACTGAGCTTGTGTATCACAAAGATAATGTCTTAAATCAAACAGTGATATTACTGTGAAATATGAAAATATCATATACTTTGTGTGCATATGCAACACAACCTTATACACTCGTGCAGTGATCGTGCAGATAAGCTCAGCTAGTTTCAATCATTATTTCCAGCTCAAGAGAGGCAGAAGTTAGTTCTAAGAAGAACTATTCTTGGATCTCACACCTTTTTTAAATAAA

Function

NR:

description
hypothetical protein cypCar_00004769

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09277337_09294501.mRNA False 2839 mRNA 0.40 9 9276431 9294802

Neighbor

gene id symbol gene type direction distance location
CI01000030_09253701_09256358 NA coding downstream 18641 9252115 ~ 9257790 (-)
CI01000030_09225959_09236989 NA coding downstream 37149 9225332 ~ 9239282 (-)
CI01000030_09176691_09178066 NA coding downstream 98365 9176645 ~ 9178066 (-)
CI01000030_09038299_09059689 NA coding downstream 216411 9038248 ~ 9060020 (-)
CI01000030_08934545_08939716 NA coding downstream 336712 8934141 ~ 8939719 (-)
CI01000030_09382055_09418356 NA coding upstream 87182 9381984 ~ 9419047 (-)
CI01000030_09433282_09440636 NA coding upstream 138114 9432916 ~ 9441088 (-)
CI01000030_09448873_09453673 NA coding upstream 153970 9448772 ~ 9454092 (-)
CI01000030_09500443_09502785 NA coding upstream 205461 9500263 ~ 9502862 (-)
CI01000030_09561245_09573575 NA coding upstream 266360 9561162 ~ 9574107 (-)
G164000 NA non-coding downstream 6224 9261853 ~ 9270207 (-)
G163693 NA non-coding downstream 57687 9217690 ~ 9218744 (-)
G163988 NA non-coding downstream 79242 9195924 ~ 9197189 (-)
G163650 NA non-coding downstream 100180 9175314 ~ 9176251 (-)
G164014 NA non-coding upstream 13017 9307819 ~ 9308194 (-)
G163786 NA non-coding upstream 30673 9325475 ~ 9325969 (-)
G164018 NA non-coding upstream 31894 9326696 ~ 9327062 (-)
G164020 NA non-coding upstream 33752 9328554 ~ 9328880 (-)
G163765 NA non-coding upstream 38552 9333354 ~ 9333908 (-)
G163873 NA other downstream 342449 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1083945 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1484049 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 1538427 7735436 ~ 7737720 (-)
G163139 NA other downstream 2126287 7149474 ~ 7150144 (-)
G164071 NA other upstream 180386 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 820713 10102944 ~ 10133765 (-)
CI01000030_10343879_10366274 NA other upstream 1070615 10343865 ~ 10366508 (-)
G164008 NA non-coding downstream 2124 9284872 ~ 9285082 (-)
G164007 NA non-coding downstream 2685 9284321 ~ 9284521 (-)
G164006 NA non-coding downstream 3588 9283288 ~ 9283618 (-)
G164005 NA non-coding downstream 4084 9282877 ~ 9283122 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location