CI01000030_09225959_09236989


Basic Information

Item Value
gene id CI01000030_09225959_09236989
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 9225332 ~ 9239282 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_09225959_09236989.mRNA
ACCTATACATAGATGAAACAAATGACCACTTTCCTGCAGAGCTGTTTGTCCATCCAGCAGATCAAACCATGTTTCTGAAGAAAACCAACCGCAGCAGGTTTCAGTTTGACTCGAGCTTGAGATGTCGAGCTGCTAGTGTCTCACCTCAGTAAGACTTGCAATGTGAGATGGCAGATGTTTTTTGCCATTTGGCAAAAACTGAATGATTATGAAGCCATTTTAAAATCCAGATTTATCAGGACTATTCAACAATAGAATATCCCACTACTTTTTCATATTTGACACAATCAGAAACTACCTTTCAAAAACCATCAGTGTTAAATGGTTAGTTCACTCAAAAAATTTAAATTATCATTATTGTCATTAATTACTCACCCTCATGTTGTTCCAAACTCGCAAGACCTTCGTACATCTTTAGAACACAAATTAAGATATTTTTGATGAAATCCGAGAGGTATATGACTCGTCCATAGATGACAGAGGGGTGTGGTTTGCAGAACTTTACACACTGGATGAGAAGCACCACATTTTAAATAAGAAAAAAATTCAGAATCCTCCATTATAATGCATTATAATTGCCCCAAATCCTTGTTAATGTAGGCTACACAAAGACTTCATCTTAGTCTGTAAGATTGTCGCTACATTTTACATCCTAGTCTCACTGCATTTTAATATCAGTGCTAATAGCCTATAAGTTAGATGCCAGACATATTTTCTTTTAAGCTTCATTTATGACTCTGGATTATCTGTATTTTTTTAGAGATAGAGATCACAGTTCTCCCATGATTCTGAAAACAAAACATTAGGCAGCCAAACAAAATAATATGTAGTCTAAGGTTCTGACAAAATGTTCTATTTAATGTTATAAATGAGTGTATTAAAATATATATATATATATATATATTAATTTAAATTAATTCCTTATGTAAAAAAATGAATGAATGAAGACTTTTGTTCAGAGTTTTTCAACAAATTTTATCAAATACATTTTAACAGTCACTGGTCGCCTCCTACAGGCTTAACAGTGTAATAGATACAATCTATATCAAGCGTAACATTAGTTTCAAAGGTCACTTACGCATTTTGCGATTGCCACAACATTGGTGTTTATATCCGAACTATAAACTTTTAACTAGTGCTGGGTGGTATTCACAGTATTTTTTTTTTCATATGATTTCCATGATTGGTCCTTGATATATGTTTATTGAGGCTTATTTTACTGTTCCCCTGTCTTGGTTTTGTGTTTATGAACTCTTGTTTTGAAGTGTGTTCTGTTCCCCATTGTTTCTGTATTTACTTCCTTGTTCAGTGCCTAATGCCACCCTGTTTGTAGTTACCCTCATTAGTTGTCATAGTGATTAATCAGTTTCAGGTGTGCCTTGTTAACCTCTTGTTATCCTGTGTATATATTCCCCTGTGTTTCAGAGCCCATCCACACAGAGATGTATCGGTGCTTTGTCCAGACGGATCTGGCATTTTATGAGCCTGAAACCGCTATTTTTTGAAACCGGGTCCCAGAGTGGATAAATCTGAAAATGACACCCTTGCATTTTCGTGTGTACAGCCAATCTGTATATTTTGTGAACAATGATGTCTTCACCCCATAAACTTTACTAAGGTTTCTGCGCATGCTCCAAGTCTTATTCTCCATTTTTAATCTATCTCTGTGGCAGAATTATAGTGCCACATACTGATCTGGCATGCATTGTTTTGAGTCGGTTTCAGTGGTTTCGTGTGTACGCAGATATATCTTGAGATGATGCCGTGTTTACAGAATTTGTTTTTAGAACAAGGAAAAAAAAAAAGATTTGGATAGGGAAAGCTCTGGCTTCATGTGGATGTGGCCTCAGTCTTGGTTTGTCAGTTGTTGTCTTTGCATGTAGTGTGAATTGTTGCACTCTTGCTCTGTGAAGTTAATAGTTACCCTCTCAAAACACTCTACATAGCACTCTTCTTGAATAGATGCAGCAATTGTGTCAGCTATGCACCGGTATGGTAGTATTTTAAATATATTGTATGCAAATTGAAACCGGTATAGCACCCAGCACTATTTTCAATGGATAAGTTAAGTCTTAAGAGTCAGAAACACACACACACACACACACACATTGTCTGGCTATTAAGACTTTATATAGGCCTATATAATAACACGCATACAGTGTGTGTGTGTGTGTGTGTGAGAGAGAGTGAAATAGTAGGGTGATCAAACTCAGTGGGGGGAGGATACACACCAGATTGCGTGTTTTCAGCAGATAGGTTTATTAGATCAGTTTTCACTGAAACACTGGAGAAAATGTTTCAGATGTTTGTTTTGTTCAGTTTGTGTTGGTGGAGTCTGACTGGTGTGTTTGGTGATTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTTTATACACTGATCTTACTGAAATACGTGAAGATGAAGACATACTGTGGAAATATGGAGCTGAAAACTCTCTGATAGCTGAAATCAGTAGAGCTGCGGGAATCTTCTCTACGTCTAACAGTCCTGATGAGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATAAACTACTGATAAGTGGAGCGAAACGATCATCAAAAACATTTAGTGTTTCTGTCTATGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCAGCTCTGTCACACATGTGCAGATCAAGGTCTACCTTTATTGTACATAGTGTTGATCTCTGCTGCTGCTGGATCTCTGTTGATTGTAGCTGCAGTCGCGATATGCTGCATCTGCAGGAGATGTAGAAAAACAGATCACACCACGTCTCTAAAAATAGACCACAGCTGCTTTCAGTTTGACTCAGAAGATGAACCTCAGTGCAACTGGTACTGTGTGATTGGTGCTGATGAAGTGAAGTCAGTGTCAGTGATGGAGGGAGATTCTGTAACTTTACACACTGATGTTACTGAACTACGTGAAGATGAAGACATAACGTGGAAATTTGCAGCTGAAACGTCTCTCATAGCTAAAATCAACATCGAGAAACAAATCTTCTCCACATATGATGAAGTTCCTGATGGGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATCTCTGACCATCACAAACACCAGAACTGAACATGCTGGAAACTATGAGCTAGAGATAACTGGAATGAAATTGTCATCAAAAACATTCAGTGTTTCTGTCTATGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGGTCTCTCTTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCACCTCTGTCACACATGTGCAGACTTCTGGCAGATTGGATCTTGCTACTGCAAAATCACATATCAGATCATATATTTAGTGTCCAGTTTGGCATTACTTTATAAAATACATGTGGATTACATGCGGACCAGATGTGGGCCAGATCTGGGCCAAAACTGTCAGAAAGACACATGCTACATCACAACCAAAAAAAATCTGTCTGCTCTTAGGGTACTAAGTCCCAATGATAAACACTTTGATAACAAATTGATGACACCACTTATGGTTTTATATGAGGTATGCACATATGGGACGTCCCCTATAAGAAGTCACTAAGTCTGTATATTATATCAGGCTGAGTTGACTTCAACATTTAAAGGGTTAGTTCACCCAAAAATTAAATTTCTGTCATTAATTACTCATTCTCCTGTAGTTCCACACCCGTAAGACCTTCGTTAATCTTCAGAACACATGAAATCCAAGAGTTTTTTTTTATCTCCCAGAAAGCAACATAATTACCTCATTCAAGGTCCAGAAAAGTAGTAAAGACACTGTTAAAATAGTCAACATGACTGCAGTGGTTAAATCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCTCAACAAACAAAATAAAAATAACTTTATTCAACAATCTCTTCTCTCCTGTCATTCTCCTACACTGTTTACATTGTATAGACAGTGCAGGCTTCCGCGTATTACATCAGAACGCTGTCTCATTATTGGCTGGCTGCTGCATCAGCATCACACGCATGCGTTCACAAGAACAGCTTCGGCCAGTACTGTGTTCTGACGTAGAACCCAGATTAATGAACAAAACATGCTTCAGACAGAGATGGGGGACGAAACGAATGCGTCTGAAAGCAAACAAATTCTTCCTAAGAGTTTTTTTTAATACACTTATTGGTAGTTCTTATAAAGCTGTATGTTTCAAATAAA

Function

NR:

description
hypothetical protein cypCar_00004769

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_09225959_09236989.mRNA False 4477 mRNA 0.38 9 9225332 9239282

Neighbor

gene id symbol gene type direction distance location
CI01000030_09176691_09178066 NA coding downstream 47266 9176645 ~ 9178066 (-)
CI01000030_09038299_09059689 NA coding downstream 165312 9038248 ~ 9060020 (-)
CI01000030_08934545_08939716 NA coding downstream 285613 8934141 ~ 8939719 (-)
CI01000030_08919811_08923927 NA coding downstream 301405 8919555 ~ 8923927 (-)
CI01000030_08880986_08884756 TMPRSS12, CELA1 coding downstream 340561 8880953 ~ 8884771 (-)
CI01000030_09253701_09256358 NA coding upstream 12833 9252115 ~ 9257790 (-)
CI01000030_09277337_09294501 NA coding upstream 37149 9276431 ~ 9294802 (-)
CI01000030_09382055_09418356 NA coding upstream 142702 9381984 ~ 9419047 (-)
CI01000030_09433282_09440636 NA coding upstream 193634 9432916 ~ 9441088 (-)
CI01000030_09448873_09453673 NA coding upstream 209490 9448772 ~ 9454092 (-)
G163693 NA non-coding downstream 6588 9217690 ~ 9218744 (-)
G163988 NA non-coding downstream 28143 9195924 ~ 9197189 (-)
G163650 NA non-coding downstream 49081 9175314 ~ 9176251 (-)
G163971 NA non-coding downstream 57152 9165934 ~ 9168180 (-)
G163970 NA non-coding downstream 74986 9149644 ~ 9150346 (-)
G164000 NA non-coding upstream 22571 9261853 ~ 9270207 (-)
G164005 NA non-coding upstream 43595 9282877 ~ 9283122 (-)
G164006 NA non-coding upstream 44006 9283288 ~ 9283618 (-)
G164007 NA non-coding upstream 45039 9284321 ~ 9284521 (-)
G164008 NA non-coding upstream 45590 9284872 ~ 9285082 (-)
G163873 NA other downstream 291350 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1032846 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1432950 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 1487328 7735436 ~ 7737720 (-)
G163139 NA other downstream 2075188 7149474 ~ 7150144 (-)
G164071 NA other upstream 235906 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 876233 10102944 ~ 10133765 (-)

Expression


Co-expression Network