CI01000030_08919811_08923927


Basic Information

Item Value
gene id CI01000030_08919811_08923927
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8919555 ~ 8923927 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08919811_08923927.mRNA
CTCGAGGACTTGGCGTGTTGTCCTGGGCGACCATGACATCTACACCCATGAAGGTCGCGAGCAGTACATGAGCGTCAGTCAAGTGTACATCCACTCCGGCTGGAACAGCAACAGTGTGGCTGCTGGATATGATATTGCTCTTCTGCGTCTGTCCTCTGAAGCCACTCTGAACTCATATGTGAAGCTGGCCACCCTTCCACCCTCTGGACAGGTTCTGCCCCACAACAACGTCTGTTACATCACCGGCTGGGGCCGCACTCAGACTGGTGGGTCGCTCTCTGCTCAGCTGAAACAGGCCTACCTGCCCGTGGTGGACTACAGTACCTGCTCTCGTAGCGACTGGTGGGGAAGCACCGTGAAGAACACCATGGTGTGCGCTGGTGGCGGCAGCTTGTCTGGATGCAATGGTGACTCTGGTGGTCCTCTGAACTGCCAGGTGAGTGGTCAGTACGTCGTCCATGGAGTGACCAGCTTTGTGTCATCATTGGGTTGCAATACCTACCAGAAGCCAACAGTCTTCACTCGTGTGTCTGCCTACAGCAGCTGGATTAGTAGCAGATCCAGTTTGATGATTCAGATTGAGTATGTTTTTGAGTTTTCCTTCAGTACCATAATAAGCACAGGCACTTTTATTCATTTCTCTTTTAGCTATGAGTCTATCTTCAGCTCCAAACAACCACAGTATCAGATCATCATCTTGTATTTCAGTATCATTGTATAGCGTGACCGAATCTCCCTCTGTCGCTGATACAGTCTTCTCTTTATTTTGTCCCGGCACCACATAAAAGAGAAAAACATGGACATTATAACAGGTGATCTGACTGCCACGTTAACATTGAAACTAACTGCTGACATTAATTACGAAGTCAAGAGGGTAAATTTTGCTCAATATTGTGATGGATTTCTGCGTTGGACCCACAAAAACTAATACAGGTTTGGATTTGGACTGACATTTCAGTGTTGAACTATTTATTAAA

Function

NR:

description
Zgc:112368 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08919811_08923927.mRNA True 977 mRNA 0.48 5 8919555 8923927

Neighbor

gene id symbol gene type direction distance location
CI01000030_08880986_08884756 TMPRSS12, CELA1 coding downstream 34784 8880953 ~ 8884771 (-)
CI01000030_08825422_08836502 NA coding downstream 82428 8825241 ~ 8837127 (-)
CI01000030_08804429_08811448 NA coding downstream 106985 8804270 ~ 8812570 (-)
CI01000030_08742145_08754205 NA coding downstream 163954 8742040 ~ 8755601 (-)
CI01000030_08729507_08739473 NA coding downstream 180040 8728693 ~ 8739515 (-)
CI01000030_08934545_08939716 NA coding upstream 10316 8934141 ~ 8939719 (-)
CI01000030_09038299_09059689 NA coding upstream 114321 9038248 ~ 9060020 (-)
CI01000030_09176691_09178066 NA coding upstream 252718 9176645 ~ 9178066 (-)
CI01000030_09225959_09236989 NA coding upstream 301405 9225332 ~ 9239282 (-)
CI01000030_09253701_09256358 NA coding upstream 328188 9252115 ~ 9257790 (-)
G163632 NA non-coding downstream 44450 8874451 ~ 8875105 (-)
G163610 NA non-coding downstream 118989 8800207 ~ 8800566 (-)
G163598 NA non-coding downstream 132619 8786674 ~ 8786936 (-)
G163605 NA non-coding downstream 136623 8782692 ~ 8782932 (-)
G163603 NA non-coding downstream 137532 8781738 ~ 8782023 (-)
G163872 NA non-coding upstream 8578 8932505 ~ 8933347 (-)
G163875 NA non-coding upstream 11214 8935141 ~ 8935887 (-)
G163970 NA non-coding upstream 225717 9149644 ~ 9150346 (-)
G163971 NA non-coding upstream 242007 9165934 ~ 9168180 (-)
CI01000030_08185866_08194632 NA other downstream 727069 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1127173 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 1181551 7735436 ~ 7737720 (-)
G163139 NA other downstream 1769411 7149474 ~ 7150144 (-)
G163065 NA other downstream 1993898 6924483 ~ 6925657 (-)
G163873 NA other upstream 9486 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 363279 9276431 ~ 9294802 (-)
G164071 NA other upstream 551261 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1191588 10102944 ~ 10133765 (-)

Expression


Co-expression Network