CI01000030_08804429_08811448


Basic Information

Item Value
gene id CI01000030_08804429_08811448
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8804270 ~ 8812570 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08804429_08811448.mRNA
AGTTGGTTCATATATATATATTTTTATGATTAAAAAGCTTTTTTTTACTACAATCCTTTGTTAATGTATGGACCTTATATGTACTATATTGCAGTGATTTGTCTCTTCAGTGTCTTTGTCACAAAAGTCGTATGTTGAAAAGACGTGCACTGAGGAGCCAAAATGAAAGTTTTTATAACGTCTTTTTTTGATGTCTTCTACACGTCCGATATAGACGTTCATGGAACCTCTGTACAAGGTTAAAAAAAAAAAAACCTCTGCCACAGATCCATCCATAGGCAGTAAAACACACGTTCACACCTTTAGACAACTTAGCATCTGTAATTCACACATCTTTGGACTGTGAGGGAAACCAGATCTGAAGGAAAGACTTTCTGGCTCAGCTGAGATTCGAACCGGGAACCTTCTTGTGAGGAGACAGTGTTTCCCACTGAGACACTTGTGCAGCCCTTAGACACATACATACATACATTTACAGGCACAAAACTCTTTGGATAGATGCTGAAATGTACAACACACACAGCAAAATCCTCAGTGAACACTGATCTGTGTTTATATGAGCCCAATGAGATAATTAGTGATTAATTAAGTGATGACTGAGAAACACATAGACATCTGACAGAAATAAAGTCAGTCCGTTTAGTAATAAGTGAAGCTGGTAATGCTGTTTGTGGAGTTGTTTAATCAGATCTTCAGAGATTTAAAAAAGTACAAGAATGGCACCCTGGCTTTGTTGCTTTGTTTAATAAAGTCTTACTTTGACTTCTGGAACACTGCCTCTTGAGATTCATTTGCAAAAAAGAGAAGACTTTTCTCCAAAACTTGCAATTCTGAGTTTATTGCACAATTCTGAGGTAAAAAAAAGTCAGAATCGCTGGATATAAACACGCAATTCTGAGGAAAAAAGTCAGAATTGTGAGATATAAACTTGAAATTACTTTATTATTCTTAGTTATTCCATGGTTTCCATAGACATGCTGCAGAACTGTAATTTTCTGCCTCTAGATAGGCTCCACCCACAAAACACATCATCACTGTTTGTAAACACTCAAATGCTCAAAATCGCCTGTTGTGTTTTTACCCATTTACAGGGTAAGAGTGGTGGGCAAACAGCCAGGGAATATGGTTCTTGCTTTTATTTTGTTCTCGTTGTGCTTGTGGCATCTGGTTGGTGTGTTTGGTGATGATGCAGATGAAGTGAAGTCAGTGTCAGTGATGAAGGGAGATTCTGTCACTCTTAACATTGATGTTACTGAAACACAGAAATATTTGTTGATACAGTGGACGTTCGGAAGCACTCGAATAGCTGAAGTCAGCAGGCTCACGCAAACCAACTCAACGTATGATGGTCCGGATGAGAGATTCAGAGACAGACTCAAGCTGGATCAAACCGGATCTCTGACCATCACAAACACTACAACCACAGACTCTGGACTTTATCAACTAACAATTGTCAGCAGAGGGTCCAGTTACATTAATTTCAATCTTACAGTCTATGATGTGACAAATGAAGTGAAGTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTAAACACTGATCTTACTGAAGTACAGAAATATTTGTTGATACAGTGGATGTTCGGAAGCACTCGAATAGCTGAAGTCAGCAGGCTCATGCAAACCAGCTCTACATATGATGAGAGATTCAGAGACAGACTGAAGCTGGATCAAACCGGATCTCTGACCATCACAAACACCAAAACCACCGACTCTGGACTCTATAAACTAACAATTGTCAGCAAAGAGACCAGCTACATGAGTTTTAATGTTAAAGTCTATGCGACTCCACAATATTCTTCATCATCAGAAAGATCAGCAAGCTCAAATTGTGTGTCGTCCAGCTGTGCGTTGAACAATTCCACCATCAACCAGACTGAGGATGCCAACATTACTGATCTCTATCAGCCAAGTTCAGATCACATCCACTGTTGTGGTTTTACTGAAGCTGTGATCCGATTGGTCATCTCTGCTCTGGTGGGTGTAGCTACTGTTGCTGTGCTGGTTTATGACATCAGGTCTACAAGAAGATGGACAGATGGTCACTGAACAGGAACAGTTCCTGTTTAGTTGATTTTGCTATAATGACTGGCTGAATCTACATTTTCCATTACTTTATGTGGACAGAACAGTTGCTAAAGAAATAATTACTTGTGATTCTTTTATAAACGTACAATAAGAAAAAAAAAAGTACAATCATAAAATAAA

Function

NR:

description
hypothetical protein cypCar_00039338, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08804429_08811448.mRNA True 2229 mRNA 0.39 6 8804270 8812570

Neighbor

gene id symbol gene type direction distance location
CI01000030_08742145_08754205 NA coding downstream 48669 8742040 ~ 8755601 (-)
CI01000030_08729507_08739473 NA coding downstream 64755 8728693 ~ 8739515 (-)
CI01000030_08704610_08727738 NA coding downstream 76516 8704532 ~ 8727754 (-)
CI01000030_08671133_08672774 NA coding downstream 131496 8671092 ~ 8672774 (-)
CI01000030_08638306_08669065 NA coding downstream 135205 8637618 ~ 8669065 (-)
CI01000030_08825422_08836502 NA coding upstream 12671 8825241 ~ 8837127 (-)
CI01000030_08880986_08884756 TMPRSS12, CELA1 coding upstream 68383 8880953 ~ 8884771 (-)
CI01000030_08919811_08923927 NA coding upstream 106985 8919555 ~ 8923927 (-)
CI01000030_08934545_08939716 NA coding upstream 121673 8934141 ~ 8939719 (-)
CI01000030_09038299_09059689 NA coding upstream 225678 9038248 ~ 9060020 (-)
G163610 NA non-coding downstream 3704 8800207 ~ 8800566 (-)
G163598 NA non-coding downstream 17334 8786674 ~ 8786936 (-)
G163605 NA non-coding downstream 21338 8782692 ~ 8782932 (-)
G163603 NA non-coding downstream 22247 8781738 ~ 8782023 (-)
G163586 NA non-coding downstream 52486 8751423 ~ 8751784 (-)
G163632 NA non-coding upstream 61881 8874451 ~ 8875105 (-)
G163872 NA non-coding upstream 119935 8932505 ~ 8933347 (-)
G163875 NA non-coding upstream 122571 8935141 ~ 8935887 (-)
G163970 NA non-coding upstream 337074 9149644 ~ 9150346 (-)
CI01000030_08185866_08194632 NA other downstream 611784 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 1011888 7788797 ~ 7792198 (-)
CI01000030_07736031_07737720 LSM7.L, GM13182, LSM7 other downstream 1066266 7735436 ~ 7737720 (-)
G163139 NA other downstream 1654126 7149474 ~ 7150144 (-)
G163065 NA other downstream 1878613 6924483 ~ 6925657 (-)
G163873 NA other upstream 120843 8933413 ~ 8933982 (-)
CI01000030_09277337_09294501 NA other upstream 474636 9276431 ~ 9294802 (-)
G164071 NA other upstream 662618 9475188 ~ 9476264 (-)
CI01000030_10103451_10131419 NA other upstream 1302945 10102944 ~ 10133765 (-)

Expression


Co-expression Network