CI01000030_10078771_10093451


Basic Information

Item Value
gene id CI01000030_10078771_10093451
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10078553 ~ 10093719 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10078771_10093451.mRNA
ATCTGTTTTCATTTCCCATTCCCAATCATAAAAAAAAACTCAACATCATCACAAGCCGGTGCCCCCTACTGCTTTGAACCGAGGGGGTGGAACGCACTTTCGCCCCTGCCCCAGCAGAGGTCTGTGCATGCCACTGCATATATCATTCATAATGTGCCAGTGCATTTAATCCATGAGCAGGGTTTGTGGGAGGATGCACACACCACATTAACAGCTCAAGTATTTTCAGTAGTCTTATTAGATCAGCCTTTTCACTGAACAATTGAAGATGTTTTACATGTTTGTTCTGTTTTGTTTGTGCTGGTGGTGCCTGACTGGTGTGTTTGGTGATTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTAAACTCTGATGTTACTGAACTACATGAAGATGACTACATCATTTGGAAATTTGGGGCTGAAATGTCTCTCATAGCTAAAATGAAAAAAAAGAAGCAAATCTTCTCTACATATGATATTCTTGATGAGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATCTCTGACCATCACAAACACCAGAACTGAACATGCTGCAGATTATCAACTAGAGATAAGTGGACTGAAACTGACATCAAAAAAATTTAGTGTTTCTGTATATGCTCGTCTGCCTGTTCCTGTCATCAGCGGTAACTCTTCACAATGTTCTTCATCATCATCATCAAATTGTTCATTGGAGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTCTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCCACCAGACTCAACATCTGGACATCACTCAACTCTGTCATACATGTGCAGCTCCTCCAGACTCAGTCTCTCAGATAGTGTTGATCTCTGCTGCTGCTGGATCTGTGTTGATTGTCACTGTAGTAGCATTGATGTGCTGCTTCTGCAAGAAATATAGAAAAACAGGTGTGTTTGAAATACAGTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTAAACACTGATCTTACTGAAATACGTAAAAATGAAGGTATACAGTGGAAATACGGAGATGAAAACTCTCTCATCGCTAAAATCAGCATTGAGAAGGAAATCTTCTCCACATATGATGATGTTCCTGATAAGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATCAACTAGAGATAAATGGAAAGAAACTGAGATCAAAAACATTCAGTGTTTCTGTCTATGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCTTCATCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAACAACACCTACAGCTGTGTGCTGAACAATCCCATCGGAAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGCAGTTCAGATTTGTGAAGATGAGAAAACTTCTGCTGTTCTGTTTCATCATCCAACGCTCTACGAAAGAAACGCACATAAATCAAACGCTGAAGAGGAGAGTCACGTTGAGTATGTGTCTGTCAGCATGAGAAGATGATTCAATCTTTTTCTAAGTACCAGATCAAGTAGCAAAAAAAACAAAAAAACAAAAAAAAAACAGGATATTTTACACTTTACACTTTTTTACACTTTTCTTCCAGTTTTACTGTGAGAATAATCAGGAAATCCAAATATGAAAATATTGAGAGTGATATTCGACTGAATATGAATCTCTCATCTTTGGTTCACAAAACAAATCCATCAAAATTCAATAAA

Function

NR:

description
hypothetical protein cypCar_00037883

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10078771_10093451.mRNA False 2013 mRNA 0.40 8 10078553 10093719

Neighbor

gene id symbol gene type direction distance location
CI01000030_10071261_10074291 NA coding downstream 3894 10071118 ~ 10074659 (-)
CI01000030_10053291_10057146 NA coding downstream 21056 10053102 ~ 10057497 (-)
CI01000030_10021914_10024391 NA coding downstream 53312 10020983 ~ 10025241 (-)
CI01000030_10016398_10019434 NA coding downstream 58537 10016209 ~ 10020016 (-)
CI01000030_09978185_09986181 NA coding downstream 92119 9978001 ~ 9986434 (-)
CI01000030_10103451_10131419 NA coding upstream 9225 10102944 ~ 10133765 (-)
CI01000030_10154139_10158476 NA coding upstream 59985 10153704 ~ 10158732 (-)
CI01000030_10172789_10173932 NA coding upstream 79018 10172737 ~ 10173996 (-)
CI01000030_10189939_10194778 NA coding upstream 96058 10189777 ~ 10194938 (-)
CI01000030_10227153_10232109 NA coding upstream 133355 10227074 ~ 10232636 (-)
G164188 NA non-coding downstream 51698 10026224 ~ 10026855 (-)
G164167 NA non-coding downstream 97151 9919610 ~ 9981402 (-)
G164165 NA non-coding downstream 169391 9908672 ~ 9909162 (-)
G163684 NA non-coding downstream 272672 9733712 ~ 9805881 (-)
G163743 NA non-coding upstream 13875 10107594 ~ 10403831 (-)
G163813 NA non-coding upstream 90305 10184024 ~ 10186590 (-)
G163739 NA non-coding upstream 106877 10200596 ~ 10202474 (-)
G164224 NA non-coding upstream 109936 10203655 ~ 10210809 (-)
G164232 NA non-coding upstream 128728 10222447 ~ 10224888 (-)
G164071 NA other downstream 602289 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 776404 9276431 ~ 9294802 (-)
G163873 NA other downstream 1144571 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 1886067 8184897 ~ 8197266 (-)
CI01000030_07788973_07791700 TUSC2B, TUSC2 other downstream 2286171 7788797 ~ 7792198 (-)
CI01000030_10343879_10366274 NA other upstream 271698 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1400619 11494183 ~ 11495854 (-)

Expression


Co-expression Network