CI01000030_10227153_10232109


Basic Information

Item Value
gene id CI01000030_10227153_10232109
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10227074 ~ 10232636 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10227153_10232109.mRNA
ATCTCACAGTAGCAGTTTTACTAAAGTTCATCTTCTGAGTCAAACTGAAACCTGCTGCGGTCTGTTTCCTGTCTTCAGTGGAGACTCTTCACAATGTTCATCATCATTATCACTGGTGTGTAAATTATACAATGACATAATTTTTCACTTCCAAAACCAGTAAATTCAATGGTATTTTACCGTAAAATTACATTAAATGTACCGTTATGAATTATTACAATATAAACCTTTAAATTACATGGTTTTGAACTGTAAAATAAACAGTAAACTAAGTGCTGTCCCTTAACCTAAAACGCTGCTACCGTATTTTTTACGGTAAAGTTCTGGCAACCACAGTTGCCGTTTTTATTATCGCTGTTTTATTTATATTATTAATAAAGAATCCATTTAGAACAGTTAAATTAATAACAGAGCTATAACATTTTTTCATATGCAAATGAGCAAGTGAAACTAGGAAGGTCAGACTGTCGTGGGAGGATTCACACCAGCATGAGTGTTTTAAACACAGTTTCATCAGACGGAAGAAAATGTTTCACATGTTTGTTTTGTTCTGTTTGTGCTGCTGGAGACTGATTGGTGTGTTTGGTGATTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTTTATACACTGATCTTACTGAAAGAGATGAAGAAGATGACATACTGTGGAAATATGGAGCTGAAAACTCTCTCATAGCCAAAATGAAGGAAAAGAACCAAATCTTCAACACATATAATGGTACTGGTGGGAGATTCAGAGACAGACTGAAGCTGGACAATCAAACTGGATCTCTGACCATCACAAACATCACACCTGAACATGATGGAGTTTATAAACTAGAGATAAGAGGAGTGAAACTGACAAATAAAACATTCAGTGTTTCTGTCTATAGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGACTATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCCCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGGTACAGCAGAGTTTGATATTAGTGTCATTACAGCACTGGACAAACACTCTCCTTCTCATCGTCCAGTCTTTCTGTTAGCGTTGATCTCTGCTGCTGCTGCTGCTGGATCTCTGTTGATTGTTGCTGCAGTCTTTGGGATCTTCTGCATCAGCAAGAAATGTAGAAAAACTGATCAAGAAGACACAGTTCAGACTCGTGCAGAAGAGATCACTTACGCTGAACCAGCATTCCACAAGAGAAAAACACAGAAATCGGATATTAAAGAAGAACAGGTGGAGTATGCACCGGTTGCCATAAGAAGATGATCAATCTTCAATCTTTTTCTAGTATCAGATCTGTGTCATCGCTCTCATGTCCATGATGTCATATAATCCTGCAGATAAA

Function

NR:

description
hypothetical protein cypCar_00046654

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10227153_10232109.mRNA True 1446 mRNA 0.38 5 10227074 10232636

Neighbor

gene id symbol gene type direction distance location
CI01000030_10189939_10194778 NA coding downstream 32136 10189777 ~ 10194938 (-)
CI01000030_10172789_10173932 NA coding downstream 53078 10172737 ~ 10173996 (-)
CI01000030_10154139_10158476 NA coding downstream 68342 10153704 ~ 10158732 (-)
CI01000030_10103451_10131419 NA coding downstream 93309 10102944 ~ 10133765 (-)
CI01000030_10078771_10093451 NA coding downstream 133355 10078553 ~ 10093719 (-)
CI01000030_10280046_10287211 NA coding upstream 47342 10279978 ~ 10287250 (-)
CI01000030_10297963_10300335 NA coding upstream 64836 10297456 ~ 10300659 (-)
CI01000030_10313822_10320039 NA coding upstream 81087 10313723 ~ 10320105 (-)
CI01000030_10321881_10332415 NA coding upstream 89235 10321871 ~ 10333450 (-)
CI01000030_10343879_10366274 NA coding upstream 111229 10343865 ~ 10366508 (-)
G164232 NA non-coding downstream 2186 10222447 ~ 10224888 (-)
G164224 NA non-coding downstream 16265 10203655 ~ 10210809 (-)
G163739 NA non-coding downstream 24600 10200596 ~ 10202474 (-)
G163813 NA non-coding downstream 40484 10184024 ~ 10186590 (-)
G163775 NA non-coding upstream 72630 10305266 ~ 10340330 (-)
G163697 NA non-coding upstream 82511 10315147 ~ 10316951 (-)
G164258 NA non-coding upstream 134812 10367448 ~ 10384031 (-)
G164071 NA other downstream 750810 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 924925 9276431 ~ 9294802 (-)
G163873 NA other downstream 1293092 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 2034588 8184897 ~ 8197266 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1261702 11494183 ~ 11495854 (-)

Expression


Co-expression Network