G164224



Basic Information


Item Value
gene id G164224
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10203655 ~ 10210809 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU186564
ATTTTAAAACATATTTGTTATGGCAAGAAAGAGATTGTGGTCAGAAGATGTTGGTAGTGATATGAAGTGAGATGAAGCCTCATGAAGCACTGAAGCTTTAAAGTGGTTCACAAAAGGGTTCATTTCTTGAGACTTTATTTGGTCACAATACCACCTGGTGGTCAAAGAGTATAAAACAATCAGATACATTACAGATGATCAGACACGCTGTATTTTGCGCCATAAGGCATAGAAGTGACGGTGGAGAAAAAAAAAAAACTATTTTCACATTACAACCACGCATTTTGAGGAGATCCCATGGGTTTATATATCTGTCAAAATGTCGCGCCAAGATTCAAACCGCTTCCTGAATCAGTCAGGCAGAAGCGAGGCATTGGTCTAAAGAGATACAAGCCTCAATACGCGCTTCACTGAAAGCATCCAGGATTTCTCGATATACGCTCTGAAGCCTCGGCACAGAACGTAACATCACTAGATGTTAGTCAATTATTAATGCTCCCAATCATCATCTAATGGCCTGATATGTTGATCTCATCAGAGTCTAATCTATTATTAATCCATGTTTTATATTTTTGATATGGAGTTCCTGTGATTCTACAGCATCAGATCATCAGTGTGTGACAACCAAATAACATGAATGATTCTGAAATCAGTTCATACTCAAAACATTTTGAACTACTGAATAACTCAGAGTCACACAGACATCAGGAATTGAAGTTTGAATCACAACAATGGTGGCAATCAAATACTTCATGCCGCAATGCATGCTGGGTACAACATAATACTAAAATCGTCTGACTCCCAGCATGCATTGCGGCATGAATAAATTATGTCACTGAATTACCTGGTTATTTTCTTTAATTCTTATTGTTTGCCTTTATTTTTGCTGTTGTTTTTGTGTTGACTTTTAGTAGTGTGTTTTGTGATTTTCAGAGTTGATCTTTTTTGAGAGACTTTTATCTTTTTTGTTCATTGTCACCGTTGTTGAGATTTATATGATGATTCTTGATGTTTCTGTGAATCTACGTTATGTTGTAATTTTAACTTTTTTTTTTTTTTTTGGTAACTGATTGGTTTAAAAAAAACAAATCCTAATTTATTGTTTTACACTGCTTTGTACTTTGCTGTAGTAACAGTGTTGGTAATATAAAAAAAAAAAAAAAAAATACATTTCACATTCATTTTTAAGATATATTTGTTATGGCATGAAGAAGCTAAGAGAAGATGTGATAATGTGTTGTTGGTTATGTTTTGATTATGACGTGATCATTATGCAATGCTTGGTTCACTGATCTCATCCAGTGTCTAATCCACAGAAAGACCAATTCTCATTTTGTAAATACACGCACACACAAACAAAATGCATCACAAAAGGCTCAATGTTACAGGAAACAACATATTTGTTACAGGAAAGTTAAAAAAAATCACTTTTGCACATTTCAACAATAGGAACATTCAGTAGCCTATGTACAGGGCCGGCCCAGGCTCTGATGGTGCCCTAAGCGAGATTTAGATAGAGCCCCCACTAAATAAATAATCATATGAACTGCAATTTACTATGAAATGAATGCTGATAAAAGTTAACATAAATATGAAGTAAATGGTAATAATTAACTAACAAATCTGTAAAGAAAAAAGAATCACAAGAATTAAACAACAAATCGACATAAACATCTAATACACTAGCCTTTTACCTGTCATCCCCATTTTTAAACATACACTGGAAAATGACATAGGCTAATTAAACTTAAATGACTGCAATTCATGACTACAGTCTAGTCATGTTTTCTTTTAAATGAACTTTACTTGCAGTTTAAAACAAGCAAAATGGCACAGTGTTAGTGTTGCTAGTAAAGTGAATCTAAAAATCCTATTTCAAAATAGTGCACTAACATCTGCCTTGAAGAGTCGCAAACTTGTGATTTAATGCTAATTGTAAAACTAATACCTATGGTAACTGCATAATCATGCATAATTACATTATAGTAATGTATTATAATTGCGTCATAATGCAGGCAATTAGTCCAACATAACATTGTCAACTATTACTTTTTTTCATGTTCTTGTCAACTTTATCGTAACATTGTAATCCAAAATACAAAAAAGGATTCATGGTCCATTTAAAATCACTAAAAAGCTGTCACTCTCAGTTCATCGCAATCTCACAAAGTTTCATTATAATCAACACAGCTGTCTACGTTGCAAAATTAATCTATTATTTATATCATGTCTGCATTTTGCTTGTTATAATGAGAGGATTTACAAGCATGAAGCGCCATTGACTCAGTCTGATTACCGTGCGGCCCGCTGTTGGCATCTGTTTCCTTAGACTCAGTCTGATTATCGTGCGGCCCGCTGTTGGCATCTGTTTCCTTAGACTCATTCTGATTATCGTGCGGCCCGCTGTTGACACCTGTTTCCTTAGACTCATTCTGACTACCGTGTGGCTGGCCAGTGATATCCGTGTTCAGAGGCTCGGTTGGACTACAGACACCCGTCTGTGGAGTCATAGTTCGATTAAGGGACATCCTTTTTTCAGCATCTATCTGTGGATTCTCAGCCGGATGAAGAGACGTCTCATTAGTGACACCATTTGTTGAATTGTCAATAAGGGACATAAGTTCTGTGACACAAATC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU186564 True 2637 lncRNA 0.35 2 10203655 10210809

Neighbor


gene id symbol gene type direction distance location
CI01000030_10189939_10194778 NA coding downstream 8717 10189777 ~ 10194938 (-)
CI01000030_10172789_10173932 NA coding downstream 29659 10172737 ~ 10173996 (-)
CI01000030_10154139_10158476 NA coding downstream 44923 10153704 ~ 10158732 (-)
CI01000030_10103451_10131419 NA coding downstream 69890 10102944 ~ 10133765 (-)
CI01000030_10078771_10093451 NA coding downstream 109936 10078553 ~ 10093719 (-)
CI01000030_10227153_10232109 NA coding upstream 16265 10227074 ~ 10232636 (-)
CI01000030_10280046_10287211 NA coding upstream 69169 10279978 ~ 10287250 (-)
CI01000030_10297963_10300335 NA coding upstream 86663 10297456 ~ 10300659 (-)
CI01000030_10313822_10320039 NA coding upstream 102914 10313723 ~ 10320105 (-)
CI01000030_10321881_10332415 NA coding upstream 111062 10321871 ~ 10333450 (-)
G163739 NA non-coding downstream 1181 10200596 ~ 10202474 (-)
G163813 NA non-coding downstream 17065 10184024 ~ 10186590 (-)
G164188 NA non-coding downstream 176800 10026224 ~ 10026855 (-)
G164167 NA non-coding downstream 222253 9919610 ~ 9981402 (-)
G164232 NA non-coding upstream 11638 10222447 ~ 10224888 (-)
G163775 NA non-coding upstream 94457 10305266 ~ 10340330 (-)
G163697 NA non-coding upstream 104338 10315147 ~ 10316951 (-)
G164071 NA other downstream 727391 9475188 ~ 9476264 (-)
CI01000030_09277337_09294501 NA other downstream 901506 9276431 ~ 9294802 (-)
G163873 NA other downstream 1269673 8933413 ~ 8933982 (-)
CI01000030_08185866_08194632 NA other downstream 2011169 8184897 ~ 8197266 (-)
CI01000030_10343879_10366274 NA other upstream 154608 10343865 ~ 10366508 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 1283529 11494183 ~ 11495854 (-)

Expression



Co-expression Network