CI01000030_10705288_10715416


Basic Information

Item Value
gene id CI01000030_10705288_10715416
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10704934 ~ 10715585 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_10705288_10715416.mRNA
ATTTTAACTACCTGTGCCTTTCTGCCAACAGTTAAATGCTGCATATAATAAAACATGTTTGCATCTCTTACATCACTGCGACCACAGCCGGTGTGTGCAGAGGTGTCACATCCTGTTAGGGGAGAATTCACATTCAGCGAATGGTCACTTATTGTGAACGGCTTAAAAAATGGTCCATGTGTTTGTTTTGTTCTATTTGTGCTGGTTGTGTCTTGTTGGCGTGTTTGGTGCGGAGACAGAGTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTCTACACACTGACACCGAAATACAAAAAGACGATCTGATACTATGGAGATTTGGAACTGAAGACTCTCCTATGGCTGAAGTCAATAGTTCAGCCCAGATCATCTCTATATCTGGAAGTACTGAAGGATTCAAAGACCGATTGCATTTGGACCCCCAGACTGGATCTCTCACTGTCAGGAACATCAGAACCAACCACTCTGGAATTTATAAAGCACAGATCATTGGACATAAGGTGTCAACGAAAATGTTCAATGTCACTGTTTATGCTCATCTTCCTGTTCCTGTCATCACCAGAGACTGTTCATCATCATCATCATCATGTTCATTGGTGTGTTCAGCTGTGAATGTGAGTCATGTGACTCTCTCCTGGTACAAAGGAAACAATTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCAGCACCGTCTCTTTACATCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCTCATCAGCAACCAGACTCAACATCTGGACATCACTCAACTCTGTCAGATACGTTCAGACTCAGACTCTGACTGTATCTGCTGTTGTGATTCTACTAAAGCTGTGATCCAATTGGTCCTCTCTGCTCTGGTGCTCGTGCTCGCGGTGTTCGCCGCTATTCTATGCGGGTTTCCAGCATCATGCGCTCGTAATTTAAATTACAGACCAATCATCGGAATTTTAGCCCAGGAAAACCTAGAGGACGACCCTCATGCACAGGGATCTTCTTATATAGCTGCATCATATGTGAAACACTTGGAGTCAGCTGGTGCCAGGGTTGTACCAATCCGCATAAATCGCACAGAGGAGGAGTATGAAAAACTATTCAACGCAATAAATGGTTTGTTGCTACCTGGAGGGAATGTGGACATTGAAAAGTCTCAGTTTACCAGAGTGGCGAAGATTTTCTATGAACTTGCAATAAAGGCTAATGATGCTTCGGATTATTTTCCGATCTGGGGCACCTGCCAGGGCTTGCAGCAGCTCACGGTTCTGACCAGCAACAAGAACTTGTTGACCTTGACCGACACCAAAGCAGTCACCCTACCGTTGACCTTCAGCCCAGGAGCCCAAAACAGCAGGTTGTTCAAAAAATTTCCAAAGGATGTTCTTCAGTCTCTGGCAGAAGAAAACATCACGTCTAATTTCCACAGCTGGAGCTTGTCCATGCAGAATTACAGTGGCAATGCCAAGCTGAAGCGTTTTTATCGAGTCCTGACCACAAACACAGACGGCAGGAAAGAGTTCATTTCCACCATGGAGGCGTCTCGATATCCCTTCTACGCTGTGCAATGGCACCCAGAGAAAAGCCCGTTTGAGTGGATTGAGAAAGCTGGTATGGTGCACACCCCCTCAGCTATCAAAGCCAGTTTCTACACTGCCCACTTCTTTGTTTCTGAAGCAATGAAAAACCATCATCGTTTTTCTTCGCAAAGTGAGGAGGAAAAGGCTCTGATTTACAACTATCAGCCCGTCTTCAAAGGCCTGGACAGCATCTTCTTACAAAATTACTACTTCGATTAAGTGTTCAAGTCATTGCTCTTGGTATTCACCATGGCAAGAAAATTATTTTTTAATTTTGTTTTTAATGTTTTTATTTCTTTCCTCACACTTTGCCAAAATTTTATGTTTGGAATGCTGGGATGTATTTTAATGTTCATGCTTCTAATGTAGCTCTTGATTGTAGATTCTGGATGTGATGTGAAGTGTTCTAGAATCATCATGACTGAATGTATTAAAGCAGTTATATCCAATTCAGAAGAATCTTCTCGTGCCATCGTTTAGAAGTTAAACTCTGTCATCGTTCACAGAGCTCACAAGCATGATCAATGCGATGTTAAAATGTCCTATTGCTTTATACATTTTAAGTAAAATAAA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01307 GGH; gamma-glutamyl hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_10705288_10715416.mRNA True 2176 mRNA 0.43 13 10704934 10715585

Neighbor

gene id symbol gene type direction distance location
CI01000030_10654923_10662255 NA coding downstream 41666 10654916 ~ 10663268 (-)
CI01000030_10635543_10640525 NA coding downstream 64326 10635417 ~ 10640608 (-)
CI01000030_10592588_10595113 NA coding downstream 109632 10591754 ~ 10595302 (-)
CI01000030_10577987_10580431 NA coding downstream 124208 10577944 ~ 10580726 (-)
CI01000030_10552198_10557500 NA coding downstream 146939 10552065 ~ 10557995 (-)
CI01000030_10732075_10737200 NA coding upstream 15764 10731349 ~ 10737535 (-)
CI01000030_10771736_10772503 NA coding upstream 55958 10771543 ~ 10772780 (-)
CI01000030_10797691_10834282 MYO9B coding upstream 81873 10797458 ~ 10836927 (-)
CI01000030_10865700_10868055 NA coding upstream 149679 10865264 ~ 10869004 (-)
CI01000030_10886966_10901232 NA coding upstream 171009 10886594 ~ 10904464 (-)
G163644 NA non-coding downstream 32908 10670248 ~ 10672026 (-)
G163648 NA non-coding downstream 75110 10626507 ~ 10629824 (-)
G164289 NA non-coding downstream 139138 10534515 ~ 10565796 (-)
G164285 NA non-coding downstream 187850 10516854 ~ 10517084 (-)
G164284 NA non-coding downstream 188254 10516448 ~ 10516680 (-)
G164333 NA non-coding upstream 31524 10747109 ~ 10756128 (-)
G164347 NA non-coding upstream 70144 10785729 ~ 10786207 (-)
G164348 NA non-coding upstream 73175 10788760 ~ 10788980 (-)
G163699 NA non-coding upstream 79445 10795030 ~ 10796442 (-)
G164353 NA non-coding upstream 141680 10857265 ~ 10857551 (-)
CI01000030_10343879_10366274 NA other downstream 338579 10343865 ~ 10366508 (-)
CI01000030_10103451_10131419 NA other downstream 583214 10102944 ~ 10133765 (-)
G164071 NA other downstream 1228670 9475188 ~ 9476264 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 778753 11494183 ~ 11495854 (-)

Expression


Co-expression Network