CI01000030_11094055_11098495


Basic Information

Item Value
gene id CI01000030_11094055_11098495
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 11093323 ~ 11098606 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_11094055_11098495.mRNA
AATCAACTTTAATGACATAAAATAATTTCTTGACGGCGTTTTTGTGTCAGATAGGAAGAGACAGACTTAACTAGGCTACTTACAATAAATCAACGGAGGAATCAATGTACAATGGGATGCTGTTTTGTGCTCACTCTGTTCGTTTTGCTCGTCAATGGTGTCTTTGCTGATGATGTGGTGACAGTGTCAGTGAGGGAGGGAGATTCAGTCACTCTAAACACTGATATTACCAAAAAACAACATGACAAGATGCTGTGGTACTTTGAAGACACTCGCTTAGCTCTAATCAATGGACATTCCAATACGAGCTGTTTATATGATGGTGAAGGCAGGAGATTCAGAGACAGACTGAAGGTGGACTATGAGACTGGATCTCTGACCATCACAAACACCAGACCTGAACACGCTGGACGTTATGAAGCAGAGATCATCAGGAGCGAAAGGTCAGGCAAAAGGCAAAGCTTGAACCGAAACCGAAAGTGTGACAGCACAAAAATAACCCAAAAAAACAGCAACACCAATGATGACACCATAAAAACTTTCAATTTGATCGTCATGGCTTCTCTGTCTGATGAAGTTAAAGTAAATGAAGAACCACAAATGGAGAAGCAGAAGTTTGACTCGGGTCAGACTTCAGCTGCTGTAGCAGGAATATGTGTTGCTGTTGTTCTGCTGGTGTTTTCAGCAGCTGTTGGTGTGATTTACTATCGCCGCAGGAGATCTAAAAATGGCAAGTATCACCTACAGATACTGTAGGGAGAGGGAAATGTTTATGCAAACAGATCTCTGAATACTTGATTCTGATTGGTTATTTGTGACATTCCAAGGTCATCAATAGCAGTGTTCTATGGTTGAAGTCCAAATGGTGTTTTTGTGCCCTTAAAGGGTACTTTTAGTGGCATGAACACCTTTTTAGTGAAAGTGAACACCTTCATTAAGGGCCCTTCCAAAAGTCTGTTAGTGACATGGTATGGTCATTTCAAAGAAGTAACTTTATCATTTATATGGCGAGTCCTCATGATTTACTTTAAATGTCAGGTATAAACGAAATAAGTCCAGATTTGTTTTGTTTGTGATATATTAAACACGTTTTTGTCATGCAATTCATATGAAGTTTAAATGGATATGGTGGTAAGAAAATGTTTAATAATAGATGTGTTCTCAGTCAGTCAGGATTCAGATAATATCTATATCAATTTCACACGTCTAGTATAAATATGTGGTCTTGTTTCATCAATACATTTCAGCACTATTTTTTTCTATACATTGTTGATATGGCAACTTGTAAGTACACTAGCCTATGGATGTACATTATTCCATACTGAGTGTTTAATTGTGTGCATATGTGATTATTTTTTAACGCAGATAAGGGGAAAAACGAGAACAAAGCACAGGTAAGATACTGCACTGAACTCTGACTTTACATCTGACCGTAAGATCTGTGTTTGATTTTACCTGCACTACAAAATCATCCAAATGACAAATAAA

Function

NR:

description
hypothetical protein cypCar_00046371

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_11094055_11098495.mRNA True 1488 mRNA 0.38 4 11093323 11098606

Neighbor

gene id symbol gene type direction distance location
CI01000030_11059372_11062362 NA coding downstream 30746 11059280 ~ 11062577 (-)
CI01000030_10987288_10989182 ATCAY, ATCAYA coding downstream 103699 10986291 ~ 10989624 (-)
CI01000030_10982784_10985399 MIBP coding downstream 107368 10982515 ~ 10985955 (-)
CI01000030_10977260_10979944 NA coding downstream 113379 10977224 ~ 10979944 (-)
CI01000030_10971452_10974167 MYDGF coding downstream 119156 10970857 ~ 10974167 (-)
CI01000030_11134706_11152138 NA coding upstream 35772 11134378 ~ 11152410 (-)
CI01000030_11179086_11180765 NA coding upstream 80167 11178773 ~ 11180867 (-)
CI01000030_11199783_11206126 NA coding upstream 101058 11199664 ~ 11206532 (-)
CI01000030_11221169_11234192 NA coding upstream 122471 11221077 ~ 11234323 (-)
CI01000030_11241933_11253802 NA coding upstream 143327 11241933 ~ 11253802 (-)
G163858 NA non-coding downstream 58338 11028116 ~ 11034985 (-)
G163694 NA non-coding downstream 71424 11017444 ~ 11021899 (-)
G164370 NA non-coding downstream 168676 10924310 ~ 10924647 (-)
G164368 NA non-coding downstream 173060 10920004 ~ 10920263 (-)
G164364 NA non-coding downstream 182906 10910164 ~ 10910417 (-)
G164397 NA non-coding upstream 76911 11175517 ~ 11176036 (-)
G163677 NA non-coding upstream 85576 11184182 ~ 11185015 (-)
G163703 NA non-coding upstream 117396 11216002 ~ 11216767 (-)
G163817 NA non-coding upstream 121808 11220414 ~ 11236862 (-)
CI01000030_10343879_10366274 NA other downstream 726968 10343865 ~ 10366508 (-)
CI01000030_10103451_10131419 NA other downstream 971603 10102944 ~ 10133765 (-)
G164071 NA other downstream 1617059 9475188 ~ 9476264 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 395732 11494183 ~ 11495854 (-)

Expression


Co-expression Network