G164370


Basic Information

Item Value
gene id G164370
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10924310 ~ 10924647 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU186729
CTTGGATTTTTGATTCTGTTTGCCCATTGGACTGTGGGTGATAGCCTGATGATAGGCTCACGGAAACTTCCAGCAGTTGAAAGACCTCCATACTCGGCATATAAACTGGGGTCCTCGGCCTGAGACAATGTCCTTTGGTAGGCCATAATTGCAAAACTGTGAAAGTTGAATCAAGTGAGGAAGAGGGCCCAAAAAGCTTGATGGGTATTGAGTTGGGGAGCTTCTTGAAGAAACCTCAAAAGCTACTCGAGATTGCGATGGTCTGTTATTACCTCGAAAAGATGTCTTGCTCCCTCCAGCCAGTGTCTCCATTCTTTCAAAGCCAGCTTAATAGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU186729 True 338 lncRNA 0.46 1 10924310 10924647

Neighbor

gene id symbol gene type direction distance location
CI01000030_10886966_10901232 NA coding downstream 19846 10886594 ~ 10904464 (-)
CI01000030_10865700_10868055 NA coding downstream 55306 10865264 ~ 10869004 (-)
CI01000030_10797691_10834282 MYO9B coding downstream 87383 10797458 ~ 10836927 (-)
CI01000030_10771736_10772503 NA coding downstream 151530 10771543 ~ 10772780 (-)
CI01000030_10732075_10737200 NA coding downstream 186775 10731349 ~ 10737535 (-)
CI01000030_10944729_10953518 CERS1 coding upstream 20082 10944729 ~ 10953518 (-)
CI01000030_10971452_10974167 MYDGF coding upstream 46210 10970857 ~ 10974167 (-)
CI01000030_10977260_10979944 NA coding upstream 52577 10977224 ~ 10979944 (-)
CI01000030_10982784_10985399 MIBP coding upstream 57868 10982515 ~ 10985955 (-)
CI01000030_10987288_10989182 ATCAY, ATCAYA coding upstream 61644 10986291 ~ 10989624 (-)
G164368 NA non-coding downstream 4047 10920004 ~ 10920263 (-)
G164364 NA non-coding downstream 13893 10910164 ~ 10910417 (-)
G164363 NA non-coding downstream 15377 10908547 ~ 10908933 (-)
G164362 NA non-coding downstream 17570 10906509 ~ 10906740 (-)
G163776 NA non-coding downstream 45211 10871354 ~ 10879099 (-)
G163694 NA non-coding upstream 92797 11017444 ~ 11021899 (-)
G163858 NA non-coding upstream 103469 11028116 ~ 11034985 (-)
G163840 NA non-coding upstream 161901 11086548 ~ 11102629 (-)
G163678 NA non-coding upstream 162961 11087608 ~ 11189504 (-)
G164397 NA non-coding upstream 250870 11175517 ~ 11176036 (-)
CI01000030_10343879_10366274 NA other downstream 557955 10343865 ~ 10366508 (-)
CI01000030_10103451_10131419 NA other downstream 802590 10102944 ~ 10133765 (-)
G164071 NA other downstream 1448046 9475188 ~ 9476264 (-)
CI01000030_11494792_11495184 CTXN1 other upstream 569691 11494183 ~ 11495854 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G240698 NA non-coding NW_019171095.1 APWO02000693.1 37239 ~ 38066 (-)