CI01000033_00313235_00315162


Basic Information

Item Value
gene id CI01000033_00313235_00315162
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 313060 ~ 315188 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_00313235_00315162.mRNA
AGAAGAAGCTTGATAACCTTAAGAACATGGCAGCATTGAAAGCATGCAAAATCCTGATCACAGGAGCCAACCGGGGCTTGGGCTTAGAAATTGTTAAGCAACTCACTGAGGATTCTCATCAAAAACATATTTTTGCTACCTGTCGTGACCCAGATGGGCCAAAGTCTGAGGCATTGAGAGAACTGGCAAAAAAGCATCCAAATGTGATTACAATCATACATCTTGATGCTGATGATCCATGCAGTGTCAAAGAGTCTGCCAAGAAAGTGGGTTCTCTACTGGGAAAGAATGGTTTAAACCTGCTAGTGAATAATGCTGCAATCGTGGCAAATGGCACCATTCAGACCAGCAGTGTTGAGGACATGAAGAACACATTCAACACTAATGTGATAGGACCCTTACTAATCATTAGGGAGTACCTACCATATCTACAAATAGCAGCCAAAGCCAGTGGGACCCCAGGCATGTCCTGTAATAAAGCAGCTGTCATCAACATCTCCACTATTGCAGGTTCCATGACCAGAATGCCTTCCATATACAACCAATTCCCAACATTGCCATATGCCGTGAGCAAGGCAGGATTTAACATGCTGACTGTGTTGGGTGCTGAGGAGTTAAAGGCAGATGAGATCCTCTGCATGGCCCTTCATCCAGGATGGGTGAAGACTGAACTGGGTGGAGATGATGCAACACTTGAACCAAAAGAAAGTGTGGAGGGGATGCTGCATGTCATTGGCAGCCTTACTGAGAAGCAGCACGGTGGATTCTTGGACTACACTGGAGAAACGGTGACCTGGTAAACCAGACGAACAAATTCTCTCCCATATCAGAGGTCACGATCCAGGTCCAAACTGCCCTATTTTATCTATTTGTCATAAAAGGGCACACCTAACCATTAGCACTTAATTTCAGGACACAAGTGTTTATGACAGACACATGACAATTTTATATCTTATTGGTATTTCAAATAATAAA

Function

NR:

description
Zgc:92161

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_00313235_00315162.mRNA True 975 mRNA 0.44 6 313060 315188

Neighbor

gene id symbol gene type direction distance location
CI01000033_00306473_00307958 NA coding downstream 5102 306333 ~ 307958 (-)
CI01000033_00295796_00298229 NA coding downstream 14828 295679 ~ 298232 (-)
CI01000033_00275565_00294358 NA coding downstream 18702 275386 ~ 294358 (-)
CI01000033_00326195_00369841 NA coding upstream 10949 326137 ~ 369841 (-)
CI01000033_00415100_00423953 QTRT1.S, QTRT1 coding upstream 99764 414952 ~ 423953 (-)
CI01000033_00482628_00490027 TMED1A coding upstream 167077 482265 ~ 490027 (-)
CI01000033_00509701_00513969 NA coding upstream 194205 509393 ~ 514281 (-)
CI01000033_00662958_00699643 ADGRL1 coding upstream 347770 662958 ~ 699643 (-)
G168167 NA non-coding downstream 329 312418 ~ 312731 (-)
G168164 NA non-coding downstream 7644 305142 ~ 305416 (-)
G168163 NA non-coding downstream 8108 304678 ~ 304952 (-)
G168125 NA non-coding downstream 82141 227506 ~ 230919 (-)
G168168 NA non-coding upstream 4959 320147 ~ 320490 (-)
G168178 NA non-coding upstream 161922 477110 ~ 478465 (-)
G168182 NA non-coding upstream 183822 499010 ~ 500751 (-)
G168206 NA non-coding upstream 202842 518030 ~ 518283 (-)
G168213 NA non-coding upstream 213477 528665 ~ 529528 (-)
G168237 NA other upstream 442183 757371 ~ 771591 (-)
G168847 NA other upstream 910400 1225588 ~ 1229549 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025705 zgc:163083 coding NC_007114.7 CM002887.2 49021079 ~ 49024570 (+)