CI01000033_00326195_00369841


Basic Information

Item Value
gene id CI01000033_00326195_00369841
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 326137 ~ 369841 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_00326195_00369841.mRNA
GGCAACGTTTGGGAGCAAGTGTTGCGCATTCCATTCATTCTGGAGATGATCAGCGCAGTTCCTTTTGTGATCACTGTGATTTTGCCCTCCCTCAGAAACTTGTTCATTCCTGTTTTCCTGAACTGCTGGCTGGCCAAACACGCTCTTGAGAACATGATTAATGACCTGCACAGAGCGATTCAGCGCACACACTCGGCCATGTTCAACCAGGTGCTCATCCTCATCAGCACCCTACTCTGCCTCATCTTCACCTGTATTTGTGGGATTCAGCACTTGGAACGAGCAGGGAACAACCTGACACTCTTTGACTCTCTGTATTTCTGTGTTGTCACCTTCTCTACGGTGGGCTTTGGTGATGTCACACCTCAGATCTGGCCCTCTCAGCTGTTGGTGGTCATCATGATCTGTGTGGCTCTTATAGTTCTACCAATACAGTTTGAGCAGTTGGCTTTCTTGTGGATGGAGCGACAGAAGTCTGGAGGGAACTACAGCCGCTATCGCGCCCAGACCGAGAAGCATGTGGTGTTGTGCGTCAGTTGTCTCAAGATAGACCTACTCATGGACTTTCTCAACGAGTTCTTCGCGCACCCTAGACTGCAGGATTATTATGTGGTCATCTTATGTCCTGCTGAGATGGACGTCCAGGTACGGAGAGTACTCCATATCCCGCTATGGGCTCAGAGGGTCATCTACCTGCAGGGATCTGCTCTCAAAGACCAGGACCTAATGAGGGCAAAGATGGATGATGCCGAGGCCTGTTTTATCCTAAGCAACCGGTTTGAAGTGGACCGCTTTGCTGCTGACCATCAGACCATACTTAGAGCCTGGGCTGTGAAGGACTTTGCCCCAAACTGCCCTCTCTATGTGCAGATCCTCAAACCTGAGAATAAGTTCCACATCAAGTTCGCAGGTCAGCGTGCAAAATGTGTTTCTCTCAGGGACTCAGACCATGTGGTTTGTGAGGAAGAGTTTAAGTATGCCATGTTGGCCCTCAACTGTGTGTGTCCTGCCACTTCCACCCTGATCACCTTATTGATTCACTCCTCTAGAGGACAAACAGCATCTTCAGAGGCCTTCAAGCAGCGAGCCGGTGCCTTCCAGCCACTCAACAGGGAAGGCGGTGCTGGCTCCGTCGACCAATGGCAGCGCACCTACAGGCGCTGTGCAGCCAATGAGGTGCACCACATCCGGCTGGAAGAGAGCAAATTTTTTGGAGAATATCAGGGAAAGAGTTTCACCTTTGCCTCCTTTCACGCACATAAGAAATACGGGGTGTGCCTGATCGGGGTGCGTAGGATGGACACAGCCAACATCCTCTTGAACCCTGGACCCTGCCACATCATGGGAGCCTCCGACACCTGTTTCTACATCAACATCTCCAAAGAGGAGAACTCAGCCTTTGTCAGGGGCCACAGAGAGCCAGTGAGGGGTGAATCCAGAGGGGTCCCGCAGACAATCTACCATGGGCTCACTCGACTACCAGTGCACAGCATTATAGCCAGCATGGGCACGGTAGCCATAGACCTGCAGGACTCTAGTGACAGCAGTCCAGAAGGCACGGGCACAGCAGTTCTGGGCAGTGGGACTGTAAGTAGGACTGGGTCCAGGACAGAAGGGGGTGGCTGTAACACTCTAGCGCTACCCGCTATGGGTGGCTCAGGGGAGGAGAGGAGGCACAGCATTGCCCCCGTCCTGGAGGTGGTCGACGGGGAGAAAATGCCATTTTGCTGTCTGCGCCTGGATAAGGCGAGTGTCTGCCTTTCTCCAAATCTTCTATATCACACAGTTCACAGATACTTATTATCTACACCCCTCTCAGCACAAGATCCTAACAGCAGATTGCTTTCTCAGGCCTGTCATCATATGCCCTATGAGGATGCTCGCTCGTACGGCTTTAAAAACAAACTGATCATCGTGTCCGCAGAAAGTGCTGGAAATGGCCTCTATAACTTCATAGTTCCGCTGCGGGCGTATTACCGGCCCAGGAAGGAGCTCAACCCCATTGTTTTGCTACTGGAGAATGTATTCTCAACATCTCTCTCTGTGCTTTTTGCTAGACCTGAGGCAGACTTCTTGGAAGCCATCTGCTGGTTTCCTATGGTCTATTACACAGTGGGCTCCATCGACAATTTGGATAGTCTTCTGCGTTGTGGCGTAACGTTTGCTGACACCATGGTTGTGGTGGATAAAGAGAGCTCCATGATCGCTGAGGAGGATTACATGGCTGATGCCAAGACCATAGTTAATGTTCAGACACTCTTCAGGCTTTTTCCAGCTCTCAGTATCATAACTGAACTAACCCACCCAGCCAACATGCGTTTCATGCAGTTCAAAGTGAAAGACCACTATTCTCTAGCTCTTTCTAAACTGGAAAAGAAAGAGAGAGAGAGAGGCTCTAACCTGGTGTTCATGTTCAGATTACCGTTTGCAGCTGGGAAGGTGTTTAGTGTCAGTATGTTAGACACTCTGCTGTATCAGTCCTTTGTGAAGGACTACATGATCTCCATCACCAGATTGCTGCTAGGTCTGGACTCCATGCCTGGATCTGGCTTCCTGTGTGCTATGAAGATCACAGAGGAGGATTTGTGGATTCGCACTTATGGCCGCCTCTACCAGAAGCTGTGCTCGTCGACAGGAGACATTCCCATCGGCATCTACCGCACTGAAGCACATAAACTGCCCGTCTCAGAGTGTTTCTGTGGAGGATTGAGTCCATTGTGTGGCTTGTCTCAGTCTCAGGTGTCCATCACGGTGGAGGATTACGAAGATACGCGTGAGCCCCGTGAGCCTCTGCTCTGCCGCTCCGGTCTTCACCGTAACTCAACATCATCCGAGCCACCCTCCTCATCCTCCTCATCATCACAGGCTATGGACCACCCGCTCCTGAGGAGGAAGAGCATGCAGTGGGCGCGTCGATTGAGTCGTAAAGGTGGACGGAACTCCAGCGGAGCCAAGGGAGTTGGGAGCGCTGCGGAGCGCATCAGCCAGCAGAGACTCAGCCTGTTCCGCCGCTCCGAGAGGCAGGAGCTCAACGCTTTGGTCCGCACACGCATGAAGCACCTGGGGCTCTCACCATCTGGATTTAATGGGATGACGGACCAGGGCAACAGACTTTCCTATATTCTTATCAACCCTTCCCCTGACACACGCCTGGAGCTCCATGATGTCGTGTGAGTATGATGATATCACAATGTAGCATTTTAAGGCACTGTTGAAATGCTTCCAAAATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_00326195_00369841.mRNA True 3232 mRNA 0.51 22 326137 369841

Neighbor

gene id symbol gene type direction distance location
CI01000033_00313235_00315162 NA coding downstream 10949 313060 ~ 315188 (-)
CI01000033_00306473_00307958 NA coding downstream 18179 306333 ~ 307958 (-)
CI01000033_00295796_00298229 NA coding downstream 27905 295679 ~ 298232 (-)
CI01000033_00275565_00294358 NA coding downstream 31779 275386 ~ 294358 (-)
CI01000033_00415100_00423953 QTRT1.S, QTRT1 coding upstream 45111 414952 ~ 423953 (-)
CI01000033_00482628_00490027 TMED1A coding upstream 112424 482265 ~ 490027 (-)
CI01000033_00509701_00513969 NA coding upstream 139552 509393 ~ 514281 (-)
CI01000033_00662958_00699643 ADGRL1 coding upstream 293117 662958 ~ 699643 (-)
CI01000033_00774703_00795792 NA coding upstream 404667 774508 ~ 808351 (-)
G168168 NA non-coding downstream 5647 320147 ~ 320490 (-)
G168167 NA non-coding downstream 13406 312418 ~ 312731 (-)
G168164 NA non-coding downstream 20721 305142 ~ 305416 (-)
G168163 NA non-coding downstream 21185 304678 ~ 304952 (-)
G168178 NA non-coding upstream 107269 477110 ~ 478465 (-)
G168182 NA non-coding upstream 129169 499010 ~ 500751 (-)
G168206 NA non-coding upstream 148189 518030 ~ 518283 (-)
G168213 NA non-coding upstream 158824 528665 ~ 529528 (-)
G168230 NA non-coding upstream 193110 562951 ~ 563245 (-)
G168237 NA other upstream 387530 757371 ~ 771591 (-)
G168847 NA other upstream 855747 1225588 ~ 1229549 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location