CI01000033_01040686_01047701 (METRNL)


Basic Information

Item Value
gene id CI01000033_01040686_01047701
gene name METRNL
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 1040686 ~ 1048231 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_01040686_01047701.mRNA
TTAGGATTCTGCCATATAAATCCTGGATCCAGCTTATATCGCCTTTCTCTACCTTCTTGTAGTGGTCTGACCCATGAGGGACACACGCGGGATGTGGAACAGGTGTATCTCCGCTGTGCCCAGGGGTTCCTGGAGTGGCTGTACCCTACAGGGGCCATCATCGTCAACCTGCGGCCAAACACGTTGTCCCCAGCGGCGTCTCTTCTCTCCGTCTGCATCAAACCCTCTAAGGAGTCCAGCGGGACCCACATCTACCTGGACCGACTGGGCAAACTGCGATTGCTCCTCCGTGAGGAAGATCAGGCAGAGGGAAGAGTGCACTGTTTCAGCATCCAGGACGGGGCGCTCTTCATCGAGGCAGTGCCTCAAAGGGACATCAGCCGAAAAATCACAGCCTTCCAGTATGAGCTGGTCAACCACAGACCAGGAGCAGATCCACAGTCATTATCTGCACCCTGCCAACCCTGTACAGATGCGGAGGTACTGCTGGCCGTTTGCACCAGTGACTTTGTGGCACGGGGAAATATTCTTGGTGTGGCAGAGGAGGACGTTCAGACCTCTGTTACCGTGTCCCTGAGTCGCCTTTACAGACAGAAGACACAAGTGTTTGTGTCAGGGGGCGGCCGGGCCAAGCGCTGGACGGGCTTTGTGAAGATGCCCAGCCAGTGCGGGGTTAAACCAGGGGAGGGCGAGTTCCTCTTCACTGGGACTGTGCGGTTCGGAGAGGCCTGGCTTAGCTGCGCTCCACGGTACAAGGACTTCCTTAGGGTGTATCAGGACGCACAGCAGCGAGGGACCAACCCATGTCATTTGGACACAGACTGAATTCTTTCCAGGAAACCACACGGTCCGCCCCGTCATGAGGAACTGTGACCCTGCGAGCAGCTGTCTGTCTCTGTTTGAGTCTGCAGACAGGAGCGGTTTAGGTCCATATAGACTGCAATATCGATGCAGAAACCTCTCGCCTGCTGTCCCAGCATTTCCTAAGACATGACTTGTGCTCTTAAAAAACCTGCTAAGACAACTAAAGTTGGACTTGTATTTACTAAGCCAATGCCGATTTCTCCTGACATGTCTTAAGACTGATGTTTTTAGATTTTTTTTTTTACTTTCTTGCGGTCAAAATGTAGCAGACCTGGCTGTTGAATGTGTAAAAATGTGAAAAGAACATTCTAAAATGAAAGTCCCAAATGCTTTGTAAAAAGCTTGTTGTACAGTTTTGCAGTTGTTTCTATGACAGAAATATATTGAAGAAAAGCCTGCTTTTTAATTTTTATTTTTTAAGAAAATTTGAAGTGCAATTCCTGCCTGTGTTTTGTCTTCAGGCTGTTCAATTGCAAATTTCCTTCCAAGGA

Function

symbol description
metrnl Predicted to enable hormone activity. Predicted to be involved in several processes, including brown fat cell differentiation; energy homeostasis; and positive regulation of brown fat cell differentiation. Located in extracellular exosome.

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_01040686_01047701.mRNA True 1355 mRNA 0.50 3 1040686 1048231

Neighbor

gene id symbol gene type direction distance location
CI01000033_00932452_00979938 TBCD coding upstream 60748 932452 ~ 979938 (+)
CI01000033_00745197_00770385 NA coding upstream 269952 745129 ~ 770734 (+)
CI01000033_00715688_00732487 NA coding upstream 307973 715096 ~ 732713 (+)
CI01000033_00702445_00711580 NA coding upstream 328793 702263 ~ 711893 (+)
CI01000033_00523275_00559791 PPAP2D coding upstream 480895 523275 ~ 559791 (+)
CI01000033_01072144_01081273 NA coding downstream 23778 1072009 ~ 1081619 (+)
CI01000033_01103460_01104059 NA coding downstream 55229 1103460 ~ 1104272 (+)
CI01000033_01178655_01186085 NA coding downstream 130162 1178393 ~ 1186146 (+)
CI01000033_01208922_01226195 HS3ST3A1, HS3ST3B1B, HS3ST3B1, HS3ST3B1A coding downstream 160400 1208631 ~ 1226246 (+)
CI01000033_01281864_01292221 NA coding downstream 233633 1281864 ~ 1292226 (+)
G168347 NA non-coding upstream 116525 923842 ~ 924161 (+)
G168339 NA non-coding upstream 133229 907193 ~ 907457 (+)
G168338 NA non-coding upstream 133971 906484 ~ 906715 (+)
G168295 NA non-coding upstream 195845 844574 ~ 844841 (+)
G168282 NA non-coding upstream 208589 831844 ~ 832097 (+)
G168401 NA non-coding downstream 50945 1099176 ~ 1099724 (+)
G168453 NA non-coding downstream 115126 1163357 ~ 1164632 (+)
G168466 NA non-coding downstream 138556 1186787 ~ 1187089 (+)
G168467 NA non-coding downstream 139714 1187945 ~ 1188151 (+)
G168473 NA non-coding downstream 154114 1202345 ~ 1202589 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025699 metrnla coding NC_007114.7 CM002887.2 48473346 ~ 48489887 (+)