G168339



Basic Information


Item Value
gene id G168339
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 907193 ~ 907457 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU191224
AGTCAAGTCACCTTTATTTATATAGCGCTTTTTACAATGCAGATTGTGTCAAAGCAGCTTTACAGTGATGAATGGTATATAATTTTGGCTGCACAGCAGCTCTTAAACAAAATGCTGTCAATGTATGCAGATGCAAAGCACTGTTGAATATCAAATGTCAAATGTCAAGTGTCCCCAACTAAGCAAGCCAAAGGCGACAGCGGCAAGGAACCCAAACTCCAACAGGTGACATCAGGTGGCAAACAGGTGGCAAATAGGTGTTAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU191224 True 265 lncRNA 0.41 1 907193 907457

Neighbor


gene id symbol gene type direction distance location
CI01000033_00745197_00770385 NA coding upstream 136459 745129 ~ 770734 (+)
CI01000033_00715688_00732487 NA coding upstream 174480 715096 ~ 732713 (+)
CI01000033_00702445_00711580 NA coding upstream 195300 702263 ~ 711893 (+)
CI01000033_00523275_00559791 PPAP2D coding upstream 347402 523275 ~ 559791 (+)
CI01000033_00497624_00498442 NA coding upstream 408714 497624 ~ 498479 (+)
CI01000033_00932452_00979938 TBCD coding downstream 24995 932452 ~ 979938 (+)
CI01000033_01040686_01047701 METRNL coding downstream 133229 1040686 ~ 1048231 (+)
CI01000033_01072144_01081273 NA coding downstream 164552 1072009 ~ 1081619 (+)
CI01000033_01103460_01104059 NA coding downstream 196003 1103460 ~ 1104272 (+)
CI01000033_01178655_01186085 NA coding downstream 270936 1178393 ~ 1186146 (+)
G168338 NA non-coding upstream 478 906484 ~ 906715 (+)
G168295 NA non-coding upstream 62352 844574 ~ 844841 (+)
G168282 NA non-coding upstream 75096 831844 ~ 832097 (+)
G168270 NA non-coding upstream 82437 824536 ~ 824756 (+)
G167925 NA non-coding upstream 257014 647306 ~ 650179 (+)
G168347 NA non-coding downstream 16385 923842 ~ 924161 (+)
G168401 NA non-coding downstream 191719 1099176 ~ 1099724 (+)
G168453 NA non-coding downstream 255900 1163357 ~ 1164632 (+)
G168466 NA non-coding downstream 279330 1186787 ~ 1187089 (+)
G168467 NA non-coding downstream 280488 1187945 ~ 1188151 (+)

Expression



Co-expression Network