G168871


Basic Information

Item Value
gene id G168871
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 1278624 ~ 1279033 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU191817
CCGCAATTTACATATGTACACACCCGGAGATGACGGAAAAACACATGGAGAGCAGCAGCTTTCATTTCTGCTCTGACAGCCACAAGACCAGCCGAAGGTCAAGTAAATCAGTAGGCGGAGAGAAGGCGATCCTTAGTGGCTGTTTGAACACATTCGACCACATGAGAGTTTAAACTACGAAAGCAAATTCGGTTGAATGCATTTTCAGATACCTCTGAAAGTAGTCGAAAGTAGACAAGCTAGCCAGATGGGATTTAAACTTTGTAGGCTGAAAACCTCATTTTGGTTTGAAGATGAAAAACGTACCAAGCACAATGTTCTCTCACCATTCCTGATTTCTAACACACTCACAGCATTCGGCCGGTCTTGCGGTAGTCATAGCAGAAACAAAAGCTGCTGCTCTCAGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU191817 True 410 lncRNA 0.44 1 1278624 1279033

Neighbor

gene id symbol gene type direction distance location
CI01000033_01274093_01274303 NA coding downstream 4186 1274093 ~ 1274438 (-)
CI01000033_01255331_01259169 GIPC1 coding downstream 19445 1254970 ~ 1259179 (-)
CI01000033_01244910_01251102 NA coding downstream 27522 1244635 ~ 1251102 (-)
CI01000033_01119076_01152170 ARHGAP44 coding downstream 126454 1118929 ~ 1152170 (-)
CI01000033_01086310_01093184 NDEL1B coding downstream 185440 1085799 ~ 1093184 (-)
CI01000033_01296158_01307173 SAMD1A coding upstream 17125 1296158 ~ 1307173 (-)
CI01000033_01312689_01320687 PRKACAA, PRKACA.L, PRKACA, KAPCA coding upstream 33593 1312626 ~ 1320687 (-)
CI01000033_01324488_01329483 NA coding upstream 45215 1324248 ~ 1329500 (-)
CI01000033_01336781_01348511 ASF1BA, AS1LA, AS1LB, ASF1BB, ASF1B.L, ASF1B coding upstream 57531 1336564 ~ 1349405 (-)
CI01000033_01362658_01368574 TUBB4A.S, TBB2C, TUBB4B, TUBB4A, TUBB, TUBB4B.L, MGC53997, TUBB2B coding upstream 82744 1361777 ~ 1368574 (-)
G168870 NA non-coding downstream 227 1278040 ~ 1278397 (-)
G168869 NA non-coding downstream 1599 1276467 ~ 1277025 (-)
G168868 NA non-coding downstream 2453 1275886 ~ 1276171 (-)
G168843 NA non-coding downstream 78039 1200340 ~ 1200585 (-)
G168877 NA non-coding upstream 95711 1374744 ~ 1374973 (-)
G168906 NA non-coding upstream 170678 1449711 ~ 1449915 (-)
G168908 NA non-coding upstream 205060 1484093 ~ 1486349 (-)
G168918 NA non-coding upstream 270246 1549279 ~ 1551732 (-)
G168923 NA non-coding upstream 288556 1567589 ~ 1567799 (-)
G168847 NA other downstream 49075 1225588 ~ 1229549 (-)
G168237 NA other downstream 507033 757371 ~ 771591 (-)

Expression


Co-expression Network