CI01000034_04090497_04095923


Basic Information

Item Value
gene id CI01000034_04090497_04095923
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 4090232 ~ 4095923 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_04090497_04095923.mRNA
GGACCTGATGTCATGGCGGTCTCTCTATTATCCTGTTGCTGGGTTTGGCTGCACTTGTGTGGAAACTGACTGCACATATGAATATGCCAAGTTTGAAGAGAAGAGGTGGGGACGACTGTCATATCCCAGTCAGGCACAGATAATGATCATATCAACAACATTCCATGTCTCTCTCTATCACAGGCTTAGTTTGACACATTCCTGCATATACACTGCAGCTGCCTCTGAAACTTTTGTTGCCATAGATACAAGACATGCACTTGCTAGAGTTTCACCGAACTCTTCTGGAACTGTTGTTTCCATGGCAGCAGCTGCACTAGAGGTGGCGATATTTCCCGACGAGCAGCAGAGCTGGGCGGAGACACTCACACTGAACAACCATGTGCATCCGGTTCGCATGATCATGGCGGCACCTGCTGTTGCTTCTGAGTCTTCCTCCGTAGAAAACATGCCAGAAACTGCTAATGGACCCACGGAGAATTCCGCTGAGGCTCAGAAACGACCGCAGTTCGGCACTCGCTTCCTCACAGACCCGCGACAGGTGTTTCAGCACAACGCGTGGGATAATGTGGAGTGGTCAGCAGAACAGGAGGAGGCCGCCCAGAAAAAAGTGCAGGAAAACAGTCAACCTCTCCCAGCAGAAAAACAAGAGGAATTTGACAGCAGGGCTAATGAGTACTGGAACGATTTCTACACCATTCACGAGAACCGCTTCTTCAAGGATCGCCACTGGCTGTTCACAGAGTTCCCTGAGCTGGCGCCTCAACAGAAGGTTCCACAGGACACCACTGCACATCTGTTAAATGGTGAAGAGTCTCCCTCTTCACACACAGACTCTACATTTCCTGGAGCCTCTGCATCCTATCGCATTCTGGAGTCAAATCCTGAGTATGACTTGTCACGGTGTCACGCATTCGTCCATGATATGAGTGATGCGTCTGCAGAGTATCCAATGCCAGACCACAGTCTGGACGTCATTGTCCTCATATTTGTTCTCTCTGCCCTGCATCCAGAGAAGATGCAGAACTCCATTAATAGATTAGCACGATTGCTGAAACCTGGAGGAGTGTTGTTATTAAGAGACTATGGTCGCTATGACATGGCACAGCTTCGTTTCAAAAAAGGGAGGTGCTTGTCTGAAAATTTCTATGTTAGAGGGGATGGAACACGCGTCTACTTTTTCACACAAGATGAGCTGCATGATCTGTTCTCCAGTGCCGGCTTGGAGAAGGTACAGAACTTGGTGGACCGACGCTTACAGGTGAACAGAGGAAAGCAGCTGACAATGTACAGAGTCTGGGTACAGTGCAAGTATCGCAAGGTCCTGGCGCCTCCTTAGAATCAAGGCTGCTTATTTGGAGAGATCGAGAACATCTGGGCTGAACTATGAGAATGTTGCTGTGTTCAGGACAGGTTGCAGTAACTTAAAAGATTGCAGTGCTGACAGCACTGAGTGAAATGGAGACTATCTTATGCAGCCTACTTGGGAATGTTGATGGAGGACATGAATTCCCAACTTCCCATGATGCACCTGAGGACCTTAAACTATTTGTTTATCATACTGAGCGATGTTTTTAAGGACTTTTTTTAATCTTATGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_04090497_04095923.mRNA True 1604 mRNA 0.48 9 4090232 4095923

Neighbor

gene id symbol gene type direction distance location
CI01000034_04087755_04088054 NA coding downstream 1468 4087563 ~ 4088764 (-)
CI01000034_04065210_04081772 TLK2 coding downstream 8460 4064519 ~ 4081772 (-)
CI01000034_04019323_04045212 MRC2 coding downstream 45020 4019240 ~ 4045212 (-)
CI01000034_03956763_03960891 NA coding downstream 129341 3956763 ~ 3960891 (-)
CI01000034_03915853_03921269 ASB16 coding downstream 168963 3915751 ~ 3921269 (-)
CI01000034_04101415_04114654 ITGB3A coding upstream 4699 4100622 ~ 4114654 (-)
CI01000034_04154954_04164874 NA coding upstream 58728 4154651 ~ 4164874 (-)
CI01000034_04165535_04172272 KCTD13 coding upstream 69450 4165373 ~ 4172272 (-)
CI01000034_04174469_04189564 SEZ6L2 coding upstream 78493 4174416 ~ 4189564 (-)
CI01000034_04216451_04218876 NA coding upstream 120311 4216212 ~ 4221881 (-)
G172297 NA non-coding downstream 26071 4063892 ~ 4064161 (-)
G172366 NA non-coding downstream 43092 4046675 ~ 4047140 (-)
G172298 NA non-coding downstream 73538 4012500 ~ 4016694 (-)
G172316 NA non-coding downstream 152766 3934545 ~ 3937466 (-)
G172303 NA non-coding downstream 157615 3931628 ~ 3932617 (-)
G172378 NA non-coding upstream 20560 4116483 ~ 4116934 (-)
G172379 NA non-coding upstream 21056 4116979 ~ 4117214 (-)
G172384 NA non-coding upstream 29196 4125119 ~ 4126846 (-)
G172398 NA non-coding upstream 105890 4201813 ~ 4202052 (-)
G172402 NA non-coding upstream 116531 4212454 ~ 4212802 (-)
G172151 NA other downstream 692419 3391144 ~ 3451802 (-)
G172016 NA other downstream 853617 3234963 ~ 3236615 (-)
CI01000034_02510595_02511512 NA other downstream 1578711 2510061 ~ 2511521 (-)
G171835 NA other downstream 1643939 2441821 ~ 2446293 (-)
G171755 NA other downstream 2223859 1864118 ~ 1866373 (-)
G172593 NA other upstream 897037 4992960 ~ 4994943 (-)
G172800 NA other upstream 1693109 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 1701647 5795835 ~ 5811781 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location