G170444


Basic Information

Item Value
gene id G170444
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 3941175 ~ 3941400 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU193631
GTAATAAGTTCAAGAATGGGAACATGTCATTTTTTTTTTTTTTTTAGTGACACCCGTGTTGCTTGTTATTTTTTTACATTTTCCATTGGTAGCCCAAAATGTGATTGTTACACTATAATAAAAAAGACTGAAAATGTGAAGTTGCACTTCAGCTTTATCTGACTTTAGTGAAATTGCTATACCTAAAGTAAATAAAATGGCCTAATTTGATCCTACAGTGTTGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193631 True 226 lncRNA 0.31 1 3941175 3941400

Neighbor

gene id symbol gene type direction distance location
CI01000034_03923671_03931871 NA coding upstream 9272 3922512 ~ 3931903 (+)
CI01000034_03900854_03907256 ATXN7L3 coding upstream 32725 3900854 ~ 3908450 (+)
CI01000034_03890532_03897571 UBTF coding upstream 41980 3890438 ~ 3899195 (+)
CI01000034_03887718_03890074 NA coding upstream 50766 3887165 ~ 3890409 (+)
CI01000034_03869116_03883535 SLC4A1A coding upstream 57485 3869116 ~ 3883690 (+)
CI01000034_03946027_03949208 NA coding downstream 4191 3945591 ~ 3949656 (+)
CI01000034_03983251_03998632 RND2 coding downstream 41851 3983251 ~ 3998885 (+)
CI01000034_04125435_04125780 RPRML coding downstream 184035 4125100 ~ 4126825 (+)
CI01000034_04149395_04151573 NA coding downstream 207173 4148573 ~ 4151726 (+)
CI01000034_04192675_04200041 NA coding downstream 251275 4192311 ~ 4200636 (+)
G170443 NA non-coding upstream 368 3940340 ~ 3940807 (+)
G170211 NA non-coding upstream 75742 3860791 ~ 3865433 (+)
CI01000034_03855726_03858565 NA non-coding upstream 81953 3855551 ~ 3859311 (+)
G170437 NA non-coding upstream 85000 3855932 ~ 3856175 (+)
G170435 NA non-coding upstream 90285 3850567 ~ 3850890 (+)
G170459 NA non-coding downstream 34367 3975767 ~ 3975989 (+)
G170226 NA non-coding downstream 71099 4012499 ~ 4016560 (+)
G170252 NA non-coding downstream 75419 4016819 ~ 4017036 (+)
G170482 NA non-coding downstream 121018 4062418 ~ 4062750 (+)
G170229 NA non-coding downstream 122492 4063892 ~ 4064150 (+)
CI01000034_03432846_03437608 NDUFA4, NDUFA4L other upstream 489326 3432846 ~ 3438839 (+)
G169806 NA other upstream 1603485 2317973 ~ 2337690 (+)
CI01000034_01729413_01730790 EVE1 other upstream 2209998 1729413 ~ 1731179 (+)
G169340 NA other upstream 2630297 1250219 ~ 1310878 (+)
G169394 NA other upstream 2747615 1150297 ~ 1193560 (+)

Expression


Co-expression Network