CI01000037_04168194_04170478


Basic Information

Item Value
gene id CI01000037_04168194_04170478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 4168194 ~ 4171137 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_04168194_04170478.mRNA
ATGGCTTTGTTCCTGGCCGTGTTTGTTGTTTTCATCCTCCATGTGAGCACTGATGCACAAGGAGCTCAAGGTCCTGCCCACCAATGTCCTGTCTTTAAAGTTCAGAGAGGGACTGTCCATAAAGCCTGTATAAATAAGCCTTTCAAGATCTCCTGCCATCTGAAGTATTGTGATAATCAGACAGTCAACATTACATGGACTAAAGAAAAACTGAAAGGATGGATTTCAGTGTCTGGAACAGGTCAAATGTCATCATCACAGAATTATTCAGCACCTGATCTTCTGACTTCATATTTAACTTTCACAAATATATCAAAGAATCATGATGGCCTCTACAGATGTGAACTACAGTTACCAAACTCATCAACATTTAGCCATTATATTAATATTTCTGTCGCAGATGACAGCCTGGGAGATGAAATGTCTTGCACTGAAAAGAAAGAAAACACTGAAAGAGACAACACAGATACCAGCTTTGATTCAAAGCCATGGTGGATGCCGTATCTCTTTATCTGTATGGGTGTAGTGATTCCTGTTCTCATATTAATACTCATCTTTATCCTGTGTATTAATGGATTTAAAACTTCGAGAAGAAGGAAAACACAGAGAGCGCAGGTTCAGTATACAGCAACATCTATCTTGTCGTCACCGAGCCCCACTGCTCTGAAGCGTGATGAATTTGTCAGCGTCCAGTACTCGGAAGAAACACAGCGGCCCTCTCGTGACAGCAACACATGCAGTTTACCATTACCACCTGTATCACATCTGTCAGATTGTGTGGGTGATGATTCTTTGTTCAACAGGAGAGATAACAGTTCAAGCCAGGTTGTATATGCATCTCTGAGCCACCTTACACCAACACCATCATCTACTGCACCCCGTCCGACAAGAGAGGAGTTTTCAGAGTATGCAGCAATCCGGGTCTCGTGATATCCCTTCTGCGGGTTATGCATAACCAGACAAAGTTAAGCAACATTTTCACGGCTCCAAAATTCATTCACAGATGAAGTTTTGTGAAACTGTACAATATTGTCTGGCTATTTTGTCTCACAGGAAGCAGGAGATGTATGCATGTTTTCATACCTCACAGTATATATCATCGCATGATGTTAATTTCCTCGTTACATCACGGAAAATTTTCGCAGTGAGTTCAATGTGGTTTCTAAGTGAAACTCATACCACTAATCATAGGCGCCTGCTGCAACACATCCATATCCTGAAGACTTGTTAGTTTACATTTTATGCACTAAAATGAAAAAGTTAATACAGTAACAGTTTGTTACATAATTATTTTCTGTTGTTGAGAATATGTTGTATTTTGGGGATTTCTAGTTGTCCTGTCAACTTGTGATTTAAAATATACAGATTTTAATAGCTTCTGTGTTACATTATTTAAAAAAAAAAAAAAAAATTATTATTATTGGTCATTTTGTCAGACTAGGATGGTTTATGATTATAATTTAAAAGTGTCCCACTTTACCTGATGCTTCTGTCTCACTTACAAAATGATTAAGGCCCTTTTGGCAATTATTAATAACTGTTACAACAATTGATTCCTGACATTTATATACATGAAGGGCCATTGATGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_04168194_04170478.mRNA True 1589 mRNA 0.38 6 4168194 4171137

Neighbor

gene id symbol gene type direction distance location
CI01000037_04080145_04081691 NA coding upstream 85388 4078481 ~ 4082806 (+)
CI01000037_04061560_04065802 NA coding upstream 102153 4061560 ~ 4066041 (+)
CI01000037_04050140_04050646 NA coding upstream 117311 4049165 ~ 4050883 (+)
CI01000037_03946645_03954021 SIK1 coding upstream 213880 3945995 ~ 3954314 (+)
CI01000037_03901647_03902747 NA coding upstream 265447 3899399 ~ 3902747 (+)
CI01000037_04175833_04178651 NA coding downstream 4696 4175833 ~ 4178651 (+)
CI01000037_04213179_04218057 NA coding downstream 41770 4212907 ~ 4218305 (+)
CI01000037_04240865_04265240 MAATS1 coding downstream 69486 4240623 ~ 4266261 (+)
CI01000037_04295697_04296550 NA coding downstream 124560 4295697 ~ 4297038 (+)
CI01000037_04505291_04507162 NA coding downstream 333573 4504710 ~ 4507166 (+)
G176701 NA non-coding upstream 56744 4071869 ~ 4111450 (+)
G176723 NA non-coding upstream 67735 4099803 ~ 4100459 (+)
G176699 NA non-coding upstream 97338 4070632 ~ 4070856 (+)
G176697 NA non-coding upstream 99200 4068782 ~ 4068994 (+)
G176773 NA non-coding downstream 9336 4180473 ~ 4189388 (+)
G176786 NA non-coding downstream 83951 4255088 ~ 4255537 (+)
G176768 NA non-coding downstream 109477 4280614 ~ 4281394 (+)
G176760 NA non-coding downstream 133962 4305099 ~ 4306561 (+)
G176377 NA other upstream 1080226 2976862 ~ 3087968 (+)
G176346 NA other upstream 1328141 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 2197803 1965603 ~ 1966435 (+)
G174949 NA other upstream 2553920 1613876 ~ 1614274 (+)

Expression


Co-expression Network