CI01000037_04061560_04065802


Basic Information

Item Value
gene id CI01000037_04061560_04065802
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 4061560 ~ 4066041 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_04061560_04065802.mRNA
GATTTTTCAGGATTTCTTGAAAATAATCCTGAAAAATTACATAACCTGTCTGTCATGAGAGCTAACTATGATAAATTAACATCTGATAAAGTGGCTAAAAGCCTAATGTTGACTAAACAAACATATTATGACCAGGGGGAAAAAGCAGCGGCGCTGGTAGACCGGCTGGACCATTGTGAGACAGGCAGGAAGAGTCGTTGTGAAGACAAAAGACTACTACGTGAAATTGCGGCGCTGGCAGAAGGGCAGAACCATCGTGAGACAGGCGGAAAGAGTCGTCGCAATAAAGAAGGCCCTTTTCTTTATAGCATGTGGTTTTAAGATTTAAGATGATATGTATTCGCTGGTTACTGTTGTATACTGCTACTAATTAACTACTTTAAGTACTTTAACTCTTCAAACTTTTATTTTTATATTTCCATCATTTATTTTTCACTGGCACAATGTGTTAATGTGATTTTAGTGGTATGACTTTAATTGTATTTTGTTAATTGATGAAATTAATATGCTGGTAAATCTGTATTGAAGTTCAGCTATGAAACGTAAAAGATGAAACCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_04061560_04065802.mRNA False 560 mRNA 0.36 3 4061560 4066041

Neighbor

gene id symbol gene type direction distance location
CI01000037_04050140_04050646 NA coding upstream 10677 4049165 ~ 4050883 (+)
CI01000037_03946645_03954021 SIK1 coding upstream 107246 3945995 ~ 3954314 (+)
CI01000037_03901647_03902747 NA coding upstream 158813 3899399 ~ 3902747 (+)
CI01000037_03875808_03891566 NA coding upstream 169173 3875488 ~ 3892387 (+)
CI01000037_03855991_03860283 UBE2A.L, UBE2A, UBE2B, UBE2AL, BRAFLDRAFT_128294 coding upstream 200259 3855991 ~ 3861301 (+)
CI01000037_04080145_04081691 NA coding downstream 12440 4078481 ~ 4082806 (+)
CI01000037_04168194_04170478 NA coding downstream 102153 4168194 ~ 4171137 (+)
CI01000037_04175833_04178651 NA coding downstream 109792 4175833 ~ 4178651 (+)
CI01000037_04213179_04218057 NA coding downstream 146866 4212907 ~ 4218305 (+)
CI01000037_04240865_04265240 MAATS1 coding downstream 174582 4240623 ~ 4266261 (+)
G176691 NA non-coding upstream 8716 4052464 ~ 4052844 (+)
G176690 NA non-coding upstream 9368 4051977 ~ 4052192 (+)
G176689 NA non-coding upstream 10119 4051205 ~ 4051441 (+)
G176680 NA non-coding upstream 25964 4035168 ~ 4035596 (+)
G176697 NA non-coding downstream 2741 4068782 ~ 4068994 (+)
G176699 NA non-coding downstream 4591 4070632 ~ 4070856 (+)
G176701 NA non-coding downstream 5828 4071869 ~ 4111450 (+)
G176723 NA non-coding downstream 33762 4099803 ~ 4100459 (+)
G176773 NA non-coding downstream 114432 4180473 ~ 4189388 (+)
G176377 NA other upstream 973592 2976862 ~ 3087968 (+)
G176346 NA other upstream 1221507 2839760 ~ 2840053 (+)
CI01000037_01965864_01966433 COA5, CB064 other upstream 2091169 1965603 ~ 1966435 (+)
G174949 NA other upstream 2447286 1613876 ~ 1614274 (+)

Expression


Co-expression Network