CI01000039_00709842_00711526


Basic Information

Item Value
gene id CI01000039_00709842_00711526
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 708970 ~ 712936 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_00709842_00711526.mRNA
TTTTATAAGACAAGATAGCATCAACACCAACAGCCCTAAACAGCTTCAGAAGTGTGCACTAAAATAAATAAATAAATAATGCCAAACCATCATATCCTACAAAATAATGTTGTTGTATATATATATATGTATATGTATATATGTATGTGTATATATGTATGTGTATATATATGTATGTATGTGTATATATATATATATATGTATATATGTATGTATATATATATATATATATATATATATTATATACATTATTAGGCCTACGTTTTTACAGCGAAAAAACGTAAAATATTTACGAATCTTTCATGTCATATATATATATATATATATATATATATATATTTCCATTTTAGCATTTTATAGATAAATGTAAGATCCCTAAATCCCACCCCAAATCTAAACATACCCATTTTATACAGAATATTAAAATAATAAAACATAATGGGCAGAAATGTGTAGGAAAATGACAATTTTAGTAACAATATAGCATTAAAACGATATTTTGAGCTGCAAATCCTACACCTACCATTGCACGGTTCGCCATGCTTTAATTTGTGGCTCGCATGGCAGTAAATAATACGGTGATATGATCTAAAGTGAAAATGAGCGGGCCAGACAGACAGAAATCTGCCCCAATGGCTTTCTATGGGAGCGCGCTGCAGTTCCATTTTTCACCACAGATTTACGTTGGAAATTTGTGGGACGCTGTAGAGCTAGGGAGGGCTCCACACAACCTGCGAGACAGAGACACTGGCTGCCCGAATACATGCCTGCCAAATCCACGCGCTACATTTTAACATATCCTGCTCACTTTGCGACTTAAAATCCGAAAAAATCTCAACCATGAACACTATAAAGAGGAAACCGCCTCACCAATGAACATCTTGCATGCCTCACAAGGATTGCAAACAACAAGCTACAAATACAACACGAAGAAAGTCAAGGAAATGCATGCTTCCGCTCATCCCAGCATTAAGATCCTCCAGATATCCCTACACCTTCCAACCCCTCAGAGAGAGAGTCTGAGAGCTGTGGAGTGCCGTGTCGGAAAGAGGAGGGCGTCTAGTGAAATGAGGGAAACATTGAAGGATCGCTCCACATCCCAATGAGAGAATTTGGTGTGGAAGTGAGTTTGTGTATGCAAGTGATCGATACCAGCAACCCATCTCGCTCATCTTGAACACACACGCGAACGCACCCAGGGTGCAACAGTGCTGTCTCACTCCGCCTCGTAATGAGTGTATAGGCTCAACACTGGCAGATGGGAGAAATGCCACCGTTGCAGAGCGTGTCACTCAGCTGTGATAAGATGTATTAGAGAGGAACCGCTCCTTAAATCATGAGAGTATAAGCATATGTTGTTTGTGCTACTTTGTTTGCTTCTGGCTGGATTTTTTTTCTGCCTGTTTTATTTGTGAACTTGCTGTGATGTGGCGGGTCTTCAACAGCTGGCTCAGTCAAAGATGTTTAATCTGGGTAAATTTATGGGAAAAAGGAATCAGAATTGGAGACGAAACGTTAAAAATTGCTAAAAGAGCTGTGAAGTGATGTGCTGCTGTAGGTCGGTAGACTAACATAACAAATATCAGTCAGAAAGCAAAGCTATTTGTCTATCACTTCTCACATAATTTGTTATAGCTCTAGATGAAAGTTTGGGAGGAGCATGTAAATCTAATGCTGTCAATCAACACAAGAACATACATTAGCGTTCAAAAGTTTGGGGTCAGAAGGATTTTTTTAAAGTGTTTTTGAGAGAAGTCTCTTATGCTCACCAAAGCTGCTTTTAACAGTAATAATGTGAAATATTAATACAATTTTAAATAAATGTTTTCTATTTTAATGTATTTTAAAATGTAATTTATTCCTGTGATGGCAAAGCTGAATTTTCAGCATCATTACCCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTTTAATACACTGATTTGCTGCTTTTTACATTTCTTATTATAAATGTTAAAAACAGTTGAGCTGCTAAATAATTTGGTGGAAATCATGGTATATATTTTAAGTATTCTTTGATGAATTGAAAGATCAAAAGAACAACATTTAAAGTACTTGAAACAGAAAACTTTTGTAACGTTATGTCTTTACTGTCACTTCTGATCAATTTAATACATCCCTGACGAATAAAAGTATTCATTTCTTTCTTTTAAACTTTGAATGGCAGTGTAAACAACCACTTAAAAATGATTAACATAATTCTGTATTTTCCCCCATTTATTTATATTATCTTTATTAATTAAGTAGTATAAAGAGAGAATATGGCTCTTATAGGTAAGCAACATGTTTACCTCCATCTCATTCAAAGATCATATGAAAATGTTGTGATTGATTTACTCTGATTCAGTTTAAGATCGAAAGATCTGTTGAATACAGATACAGTGGTCCCAAAAAGTATTTAGACACTTAAGCCACAGCCAAAATGAATTTTATTGCATTATATAACAAAAAAATCAAAACATTTCATAAAAACAAGTTTGTTGGGTTTTAA
>TU202366
TGAGAGCTGTGGAGTGCCGTGTCGGAAAGAGGAGGGCGTCTAGTGAAATGAGGGAAACATTGAAGGATCGCTCCACATCCCAATGAGAGAATTTGGTGTGGAAGTGAGTTTGTGTATGCAAGTGATCGATACCAGCAACCCATCTCGCTCATCTTGAACACACACGCGAACGCACCCAGGGTGCAACAGTGCTGTCTCACTCCGCCTCGTAATGAGTGTATAGGCTCAACACTGGCAGATGGGAGAAATGCCACCGTTGCAGAGCGTGTCACTCAGCTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_00709842_00711526.mRNA False 2516 mRNA 0.35 2 708970 712936
TU202366 True 281 lncRNA 0.52 1 711441 711721

Neighbor

gene id symbol gene type direction distance location
CI01000039_00521668_00538621 NA coding upstream 169233 521580 ~ 539737 (+)
CI01000039_00456713_00492445 NA coding upstream 214789 455981 ~ 494181 (+)
CI01000039_00438534_00441842 NA coding upstream 266740 437469 ~ 442230 (+)
CI01000039_00430014_00430412 NA coding upstream 278433 429442 ~ 430537 (+)
CI01000039_00390881_00400543 NA coding upstream 308355 390639 ~ 400615 (+)
CI01000039_00753373_00753959 NA coding downstream 40237 753173 ~ 754791 (+)
CI01000039_00918013_00930418 NA coding downstream 203460 916396 ~ 930664 (+)
CI01000039_00945143_00973554 NA coding downstream 232040 944976 ~ 974142 (+)
CI01000039_00982878_00985676 NA coding downstream 269814 982750 ~ 985752 (+)
CI01000039_00995716_00997695 NA coding downstream 282733 995669 ~ 997834 (+)
G178172 NA non-coding upstream 27119 681641 ~ 681851 (+)
G178137 NA non-coding upstream 67204 641550 ~ 641766 (+)
G178115 NA non-coding upstream 92823 615853 ~ 616147 (+)
G177683 NA non-coding upstream 175453 533264 ~ 533517 (+)
G177673 NA non-coding upstream 190677 518051 ~ 518293 (+)
G178206 NA non-coding downstream 18404 731340 ~ 731894 (+)
G178207 NA non-coding downstream 19753 732689 ~ 733081 (+)
G178347 NA non-coding downstream 148510 861446 ~ 861689 (+)
G178354 NA non-coding downstream 160327 873263 ~ 874138 (+)
G178423 NA non-coding downstream 233017 966676 ~ 982406 (+)
G179528 NA other downstream 1784738 2497674 ~ 2498619 (+)
G179798 NA other downstream 2416636 3129572 ~ 3132184 (+)
G179903 NA other downstream 2711101 3424037 ~ 3425555 (+)
CI01000039_04048342_04049635 NA other downstream 3335357 4048079 ~ 4049972 (+)

Expression


Co-expression Network