CI01000039_03747667_03748958


Basic Information

Item Value
gene id CI01000039_03747667_03748958
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3747315 ~ 3749287 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000039_03747667_03748958.mRNA
GCATATAGACGTGCGGACGCTTGGAGGTCGTGTACAGCAGCTGGAGGAGTTTGCGGAGAGATATTTTTACTCATCTGTCTTTCTTTTTCGTTACATTCATTTATATTTCCTATTATTCGTATCTCATGAACTGTTGTTTCCGAACACATCTGGTCTGTGATGTGAAAACTGTTTTCTTGGATAGGATACGCTCTTGGATTTGGATGCGTTTGGAAGTCTGGGTCGTGTGATTCATATACTAGTCAACTTCTTCCCCTCTTCCGATGTTTCTCAACTCTCAAGATAGATTGATGGTTTGAAGAGCAGTGAGAGACTGAACTTTATATCAGGAGCTTGTATTCCTCTTTGAATGATGCCCATAAACAGACTCGCAGACATGGAGGAGAAACTTCGTATTTTGGAGGATCTCAATATGATATACATCCGTCAGATTGCCCTGAGTTTAAAGTCAGTAATGCTTAAAACGGAGAAGCAGCAGCAGTATTTCTCCAATGGTCCTGCTGCAGCCGCAATCACACAAGACAGAGTCTCATGGGATGAAAGGTGCCTGTTCTCCTCACCGAGCAGACAGATTATGTACTCACTATTCCTGCAATGCGACCCTAAATTTGAAGCCTGAGATAGTGAAAGGACATGGCGGCGCCTCCTTTGAGCTGAAGGACATCTTCATAGATTCCTGGTGCTTTTAAATATTTCATGGTCATGCATCTCAATGTTGGCAGTCTTGAGTTCTCAGAAGTCAATTAGCTTCAAGCCTGTGTCCGTTTGAAAGGGCCTCTGTGTATAAATTTAATCACCCATGTGATCTTCATGTAAAAAATGGACTCTTTGTATGATCTAGCAAAATGCTGCCCACTGTAGGCATGTTGGATTCCTTCTAAATTAGGGTTGGACATGAGAACTTGATGTGACGGTATAATGATTGATCATGAAAACACAAATATACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000039_03747667_03748958.mRNA True 948 mRNA 0.42 3 3747315 3749287

Neighbor

gene id symbol gene type direction distance location
CI01000039_03694332_03696941 NA coding upstream 50245 3694332 ~ 3697070 (+)
CI01000039_03684191_03691901 MCCC2, MCCC2.S coding upstream 55383 3684191 ~ 3691932 (+)
CI01000039_03665710_03683733 NA coding upstream 63465 3665247 ~ 3683850 (+)
CI01000039_03659569_03662364 NA coding upstream 84663 3659569 ~ 3662652 (+)
CI01000039_03651436_03658228 NA coding upstream 89051 3651436 ~ 3658264 (+)
CI01000039_03782970_03797693 RTKN coding downstream 33683 3782970 ~ 3798506 (+)
CI01000039_03932128_03934945 NA coding downstream 182240 3931527 ~ 3935935 (+)
CI01000039_04011515_04015116 GRSF1 coding downstream 262162 4011449 ~ 4015116 (+)
CI01000039_04017602_04018203 GRSF1 coding downstream 268315 4017602 ~ 4018468 (+)
CI01000039_04048342_04049635 NA coding downstream 298792 4048079 ~ 4049972 (+)
G180032 NA non-coding upstream 35952 3710471 ~ 3711363 (+)
G180031 NA non-coding upstream 37354 3709574 ~ 3709961 (+)
G180029 NA non-coding upstream 39323 3707424 ~ 3707992 (+)
G180028 NA non-coding upstream 40164 3706899 ~ 3707151 (+)
G180026 NA non-coding upstream 43711 3703395 ~ 3703604 (+)
G179994 NA non-coding downstream 55062 3804349 ~ 3835814 (+)
G180051 NA non-coding downstream 94101 3843388 ~ 3843627 (+)
G179991 NA non-coding downstream 95171 3844458 ~ 3845544 (+)
G180067 NA non-coding downstream 129229 3878516 ~ 3879039 (+)
G180093 NA non-coding downstream 166127 3915414 ~ 3916712 (+)
G179903 NA other upstream 321760 3424037 ~ 3425555 (+)
G179798 NA other upstream 615131 3129572 ~ 3132184 (+)
G179528 NA other upstream 1248696 2497674 ~ 2498619 (+)
G178423 NA other upstream 2761563 966676 ~ 982406 (+)
G180149 NA other downstream 325589 4079419 ~ 4079563 (+)
G180156 NA other downstream 341711 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 474292 4223868 ~ 4224657 (+)
CI01000039_04829464_04847182 ZFR other downstream 1094895 4829413 ~ 4848563 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G37123 NA non-coding NC_056703.1 CM032072.1 16053032 ~ 16054008 (+)