G180051


Basic Information

Item Value
gene id G180051
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000039
NCBI id null
chromosome length 8355537
location 3843388 ~ 3843627 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU204428
ATTGTAAAGTGTTACTGAACTTGCCTGTGTTTGCATGACAACCAAAGACCTCATACTACAACTGATTTATTAAATCGCTGGAGACTAAGATTTTTATCTGATTCTGTCTTGGCATTTGAGGGACTTGGGGAAAGAAGGCAGTAACTTTTTGATGACTCAGCTATTTTGTTAGCTACTTTGTGAAGGAGAGTTTTAACACAAGAGCCAGCTGGATAACAGTTTGACTTACTGTGAAAACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204428 True 240 lncRNA 0.38 1 3843388 3843627

Neighbor

gene id symbol gene type direction distance location
CI01000039_03782970_03797693 RTKN coding upstream 44882 3782970 ~ 3798506 (+)
CI01000039_03747667_03748958 NA coding upstream 94101 3747315 ~ 3749287 (+)
CI01000039_03694332_03696941 NA coding upstream 146318 3694332 ~ 3697070 (+)
CI01000039_03684191_03691901 MCCC2, MCCC2.S coding upstream 151456 3684191 ~ 3691932 (+)
CI01000039_03665710_03683733 NA coding upstream 159538 3665247 ~ 3683850 (+)
CI01000039_03932128_03934945 NA coding downstream 87900 3931527 ~ 3935935 (+)
CI01000039_04011515_04015116 GRSF1 coding downstream 167822 4011449 ~ 4015116 (+)
CI01000039_04017602_04018203 GRSF1 coding downstream 173975 4017602 ~ 4018468 (+)
CI01000039_04048342_04049635 NA coding downstream 204452 4048079 ~ 4049972 (+)
CI01000039_04058417_04059141 NA coding downstream 214716 4058343 ~ 4059526 (+)
G179994 NA non-coding upstream 7574 3804349 ~ 3835814 (+)
G180032 NA non-coding upstream 132025 3710471 ~ 3711363 (+)
G180031 NA non-coding upstream 133427 3709574 ~ 3709961 (+)
G180029 NA non-coding upstream 135396 3707424 ~ 3707992 (+)
G180028 NA non-coding upstream 136237 3706899 ~ 3707151 (+)
G179991 NA non-coding downstream 831 3844458 ~ 3845544 (+)
G180067 NA non-coding downstream 34889 3878516 ~ 3879039 (+)
G180093 NA non-coding downstream 71787 3915414 ~ 3916712 (+)
G180098 NA non-coding downstream 93032 3936659 ~ 3936885 (+)
G180103 NA non-coding downstream 108577 3952204 ~ 3952553 (+)
G179903 NA other upstream 417833 3424037 ~ 3425555 (+)
G179798 NA other upstream 711204 3129572 ~ 3132184 (+)
G179528 NA other upstream 1344769 2497674 ~ 2498619 (+)
G178423 NA other upstream 2857636 966676 ~ 982406 (+)
G180149 NA other downstream 231249 4079419 ~ 4079563 (+)
G180156 NA other downstream 247371 4090998 ~ 4091608 (+)
CI01000039_04223888_04224220 EMC6.S, EMC6, EMC6.L other downstream 379952 4223868 ~ 4224657 (+)
CI01000039_04829464_04847182 ZFR other downstream 1000555 4829413 ~ 4848563 (+)

Expression


Co-expression Network