XLOC_009158 (CR848757.1)


Basic Information

Item Value
gene id XLOC_009158
gene name CR848757.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 19929495 ~ 19932848 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018021
ACAAATGCATAGCTTTAATGATTTTAATCAGTTTCATTCAATGCAAGCTCACAACACAAGCACATCACACTTAAGAATTGCCACATCTGATGGCCCTATGTTGCTTAATATACAGGCACTGCCGTAATGGAAAGCATAGCTTGAGAATAGCACCTAGAAATGGTGTGCACAGCACGTGTGGGACAACCCAGGAGCAGCTCGGGACCAAGAGGCTGTAGATCAACACTGAGAGGGCTCTCACCCCTCCAGACCCACTCACAATAATTGATGACTGACATACAGATGACagtatagctatGCTTTTGACAGGAATGAGTCTGTCTGACAATCACAGGAACCTCCACTGCATCAATCATGGGTGATATGGAAGCAAAGCAGGCAGTTTTTAGGTTTACATCAGCGAATTCAGTAATTACATTAGCATGAGGTCACATGTGAATGTTGCTTTATTGTGAGCAGAGCAAGCTAagcataaatatatgttgcataatGCTCTACACTACAATCACACTTTAAAAGAGACCATGCctcaatttgtttaaaaagtcTGTAGTCTAAAGAGGTGAAATACGCATTTTGATCTTAAATGTAAAGCAAGATCGTGTTGGTTTGCTAAACGTGGTGTGTTTGTTTACTCATTCGACGTCTAACTGCTAATTTGTGGTGTAACACTGTCAAACGATCTTTAAACATGCAGTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097182

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018021 True 699 lncRNA 0.41 2 19929495 19932848

Neighbor

gene id symbol gene type direction distance location
XLOC_009157 NA coding downstream 135884 19784491 ~ 19793611 (-)
XLOC_009156 picalmb coding downstream 157123 19726229 ~ 19772372 (-)
XLOC_009155 sytl2b coding downstream 204563 19697246 ~ 19724932 (-)
XLOC_009154 si:dkey-4p15.4 coding downstream 247625 19678772 ~ 19681870 (-)
XLOC_009153 hspa8b coding downstream 251984 19661498 ~ 19677511 (-)
XLOC_009159 auts2b coding upstream 71918 20004766 ~ 20024205 (-)
XLOC_009160 med13b coding upstream 127795 20060643 ~ 20125331 (-)
XLOC_009161 exoc3l2b coding upstream 206183 20139031 ~ 20190052 (-)
XLOC_009162 ppp1r14ab coding upstream 271780 20204628 ~ 20233105 (-)
XLOC_009163 AL928724.1 coding upstream 305580 20238428 ~ 20239598 (-)
XLOC_009152 CU013548.1 non-coding downstream 346480 19581907 ~ 19583015 (-)
XLOC_009151 BX324151.1 non-coding downstream 386561 19542820 ~ 19542934 (-)
XLOC_009150 BX324206.1 non-coding downstream 572106 19357270 ~ 19357389 (-)
XLOC_009147 NA non-coding downstream 642895 19285164 ~ 19286600 (-)
XLOC_009164 NA non-coding upstream 320895 20253743 ~ 20281793 (-)
XLOC_009166 CR626887.2 non-coding upstream 412064 20344912 ~ 20345732 (-)
XLOC_009172 CR848784.4 non-coding upstream 865280 20798128 ~ 20799830 (-)
XLOC_009173 CR848784.5 non-coding upstream 876861 20809709 ~ 20811411 (-)

Expression


Co-expression Network