XLOC_009161 (exoc3l2b)


Basic Information

Item Value
gene id XLOC_009161
gene name exoc3l2b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 20139031 ~ 20190052 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018027
GAGAGCTGTGAACTGTTGTGTTGAGCTGCTGAGCTTGTCACTTGCACTGAGCGCTGGTTTACACTGGTGAAGGCAAACATAAGTGTGACGTTACTCGTGTTGAATTAATATCGCATTATTTAATTCAAATACACATTTCTATTCGTTCCTGTCATGGAGGCAATTCGACATGGACTCCCATACATCCTCCCAGCGCAACCATGCCAGTCCTCAAGAACCTCCCGTCTCGGCTAAAGGGAGGCAGGTTTAGCGTGGATTTGGAGACTACGCGGAGCGAGTTTATTCTCAGAAAAATGAGCCTTAACCACAATCCATTCGAGGAGCCTGGCTCAGATGAGGACTGGCCCAGAAGCAACGGAGGCTCACTGCTAGATGGACGTGTGCCCCGGGACAGAAACCCGTTTGAGGATGAGGAAGATGAGAACGAGGCCAATGAGGTGCGACGTGGAGGATCGGGGAAGGGAGGCTCCATCAAAGGCACACTGGAGCGCATGAAGGGGGTCTCACCCCTTAAAACTCTGGGCAAACTGGGAAAGAACCTGCGCCTGTCTAGCAGGAGCAAAGGCAGGGAGACTCCGTCCCCACAGGGCTCTATAGGTTCAGCCTCGCCCATGGAGAGGAAGAAGAAGGGCAGACGGAGTTCAGAAGGAAGCTTGCTTCGAATGGCCGGAAGGTGTAAAGATCGTAAAGAGAGTTTGACCAATGGTGAACTTTGTTCAGAAACTGATGCTGACTCCACTAGTCGTCGTCTCTCCTTCTTGAAGATGGTGGGCAAGGGCAAGATGAAGAGGGAGTCCCTACAGGATCACTCATCGCAGGGACCAGAGGAAGAGCCGGTGGAGGAGGTGCCCGAGGTCAAACCCAGAGAGCCACTGTCAGTATTGGAAATCCTGCAGTTGGTGACAAAACGTGATTTGTTTTTGGCTGACACTCACATTCTGGAACTGGAGCAGGAGTGCAGAGAGGCCGAATCTCCGACGGCAGGAGGCACGGAGGATTTCAGCAGCCCCAGCAGCAAAGACAGCAGTCGGCGCAAAGCCAAAGACGTGGAGCTGCTGTACGAGGCGCTGCAGAAAGAGCTGTGGGACGTGGTGAGGGATTCtctgcgctgccccaccgctgggcCAAACCTGGGCCTGGTGGTGCAGGTGCTCCAGCAGGAGGAGCAGGCAGATCGGGACTGGGCTCAGAGTGAAGGAGCCGCTCCTGGAGGTCCGCGGCCCAGGGAGTTTAGGAAGCGCTGGAAAGAGGCGGTCGTTGAGTTGGCTGATGCAAACTTACCCCAGCATGCAGAAGCTCGGGCAGGTGAGCTCGCCACCTTTCTGGATAAACTCCGAGTGCGTATGGTGGAGGACCTTGGAGCGGCCCGCCGTAATGCGGTGTCTGTATATCCTGCCGAATATGACTCCTTCCAAGTGTATACACAGAGCTACCATCAGGCCGTGACTCGCCGACTCCAGGCTCTCACCAACGGAGATCTGCAGATCACTGACATATACTCGCTGCTAGACTGGCTCTACAACATTTATAACAGAGATGTCCTTGGAACAGTCACTATAACAACACCCATTAACCTCTCGCAGCTCGGCCCGCTGCTGCCCACAGAGACGGTGGACAAACTGGAGCTCGACTGCCTCAACTCCGTCAGGGGGAAAGTGACCAATGAGCTCTCTCAGGTTctagaggaggaggagaagagatGGCTGGACACACTGAACATCGAGGAGTATCAGATACCCCTGGCTCGCACAGTTATTCAGAGGCTACAGGAGGATCTTGAGAGATCTGCGGCTGTAAACAGACATTTGGGTTCACGGGTTGCACAGTGCAGTCTCAATGGACTGGCAGATTTTCTGTACAGTTTTCAGAGGAAGGTGGAGATGTTCCATGAGATGCTGGTGAGCAGCTTTGGAGAAAATGAAGATGGTTACATCGCTAAAACCATTGCCCTTGCCAACTGCTGTCCATCGTTCAGGAGCTTTGTGCAGCGCTGCGGCCAGTGTGACCCCTCGACCAGCGAGGACTCCATCCGGCGTGCCAACAGCGCTCTGGACAGGATAGTCAACCTGAGTGTGCGAGTGCTGAACGACAGGCTTTTCGAGCATATCAGGCCCTTCTTTGATAAGCTGATTAAACGGAAATGGCTGAGCAACACTGAGccttttgagcagattgaggcaCTCATTAAAGAGCACTTCAAGAAGTTTCGCAGGATGGACAACCCACCTTATGAGGTCCTGGTGGTGGAGGTGCACCGGCGTGTGATGACGGAATATGTGCGGGCCATTATGAGGGGCAGAATCATCTGCACTTCTCTCAAAATGAGGAAGAGGATGGCTGGACGCCTTCGGGATGAAGGAAAGCACCTAAAAACACTCTTCAAAGAGCTGGAATCTTCAGCCTCCTGGCTCGACAGCGCTATTCCTCACCTTTCAGAGATCATTCTCTTGGAAGACACTCCCTCCATCCAGATGGAAGTTGGCGTGTTGGTACGGGAATTCCCGGACATACGAAGAAAGCACGTCTCTGCCATACTCAACATCCGCGGAATGACCCGGCAAACCGAGAGGCAGGAAATCCTGAATATAGTGAAAGACATCGAGAACAGCGACAGCGTGGCCCGAGTGTCCCGGGACAGGGCTCTGTTCGCCGAGGTGCCGGTGACGTCAGAAGTGCACTGTCTAAATCTAGGCCTGAGCCGTGTGGCCCTCACTGCCTCCAACCTCTTTTCCAGCATGCGGAGAAGAAGGACTCCGACCAGGGAAAACCACGACGATGTGCTGTAACTCATCTCACAGAGCACTGGAACAATGAATTTACTAAAATGTCTGCTAGTGGTGTTGTCTTTTCAAATGGACCTAAATAAAGACATCGTATAGAGATGCTTGAAATTGCAGGATATCTGAGAAAATGACACTACAGTTGGCATCACTACAACGGTTTTTGCACAACTAACATTGCGAAGGCTTGTGTGGATCACAGTGGCACCAAAAAACATGTTGGCACTTTACGCACACTTTAAAAGGGTGTGAATGTGTCTGCATTAtatagcaaaaaaaacaaaccaagtgtcatactgtaaaaaaaaaattcaggctcattattgatatgtaaccctgtatatatttctgga
>TCONS_00018028
ATGCCAGTCCTCAAGAACCTCCCGTCTCGGCTAAAGGGAGGCAGGTTTAGCGTGGATTTGGAGACTACGCGGAGCGAGTTTATTCTCAGAAAAATGAGCCTTAACCACAATCCATTCGAGGAGCCTGGCTCAGATGAGGACTGGCCCAGAAGCAACGGAGGCTCACTGCTAGATGGACGTGTGCCCCGGGACAGAAACCCGTTTGAGGATGAGGAAGATGAGAACGAGGCCAATGAGGTGCGACGTGGAGGATCGGGGAAGGGAGGCTCCATCAAAGGCACACTGGAGCGCATGAAGGGGGTCTCACCCCTTAAAACTCTGGGCAAACTGGGAAAGAACCTGCGCCTGTCTAGCAGGAGCAAAGGCAGGGAGACTCCGTCCCCACAGGGCTCTATAGGTTCAGCCTCGCCCATGGAGAGGAAGAAGAAGGGCAGACGGAGTTCAGAAGGAAGCTTGCTTCGAATGGCCGGAAGGTGTAAAGATCGTAAAGAGAGTTTGACCAATGGTGAACTTTGTTCAGAAACTGATGCTGACTCCACTAGTCGTCGTCTCTCCTTCTTGAAGATGGTGGGCAAGGGCAAGATGAAGAGGGAGTCCCTACAGGATCACTCATCGCAGGGACCAGAGGAAGAGCCGGTGGAGGAGGTGCCCGAGGTCAAACCCAGAGAGCCACTGTCAGTATTGGAAATCCTGCAGTTGGTGACAAAACGTGATTTGTTTTTGGCTGACACTCACATTCTGGAACTGGAGCAGGAGTGCAGAGAGGCCGAATCTCCGACGGCAGGAGGCACGGAGGATTTCAGCAGCCCCAGCAGCAAAGACAGCAGTCGGCGCAAAGCCAAAGACGTGGAGCTGCTGTACGAGGCGCTGCAGAAAGAGCTGTGGGACGTGGTGAGGGATTCtctgcgctgccccaccgctgggcCAAACCTGGGCCTGGTGGTGCAGGTGCTCCAGCAGGAGGAGCAGGCAGATCGGGACTGGGCTCAGAGTGAAGGAGCCGCTCCTGGAGGTCCGCGGCCCAGGGAGTTTAGGAAGCGCTGGAAAGAGGCGGTCGTTGAGTTGGCTGATGCAAACTTACCCCAGCATGCAGAAGCTCGGGCAGGTGAGCTCGCCACCTTTCTGGATAAACTCCGAGTGCGTATGGTGGAGGACCTTGGAGCGGCCCGCCGTAATGCGGTGTCTGTATATCCTGCCGAATATGACTCCTTCCAAGTGTATACACAGAGCTACCATCAGGCCGTGACTCGCCGACTCCAGGCTCTCACCAACGGAGATCTGCAGATCACTGACATATACTCGCTGCTAGACTGGCTCTACAACATTTATAACAGAGATGTCCTTGGAACAGTCACTATAACAACACCCATTAACCTCTCGCAGCTCGGCCCGCTGCTGCCCACAGAGACGGTGGACAAACTGGAGCTCGACTGCCTCAACTCCGTCAGGGGGAAAGTGACCAATGAGCTCTCTCAGGTTctagaggaggaggagaagagatGGCTGGACACACTGAACATCGAGGAGTATCAGATACCCCTGGCTCGCACAGTTATTCAGAGGCTACAGGAGGATCTTGAGAGATCTGCGGCTGTAAACAGACATTTGGGTTCACGGGTTGCACAGTGCAGTCTCAATGGACTGGCAGATTTTCTGTACAGTTTTCAGAGGAAGGTGGAGATGTTCCATGAGATGCTGGTGAGCAGCTTTGGAGAAAATGAAGATGGTTACATCGCTAAAACCATTGCCCTTGCCAACTGCTGTCCATCGTTCAGGAGCTTTGTGCAGCGCTGCGGCCAGTGTGACCCCTCGACCAGCGAGGACTCCATCCGGCGTGCCAACAGCGCTCTGGACAGGATAGTCAACCTGAGTGTGCGAGTGCTGAACGACAGGCTTTTCGAGCATATCAGGCCCTTCTTTGATAAGCTGATTAAACGGAAATGGCTGAGCAACACTGAGccttttgagcagattgaggcaCTCATTAAAGAGCACTTCAAGAAGTTTCGCAGGATGGACAACCCACCTTATGAGGTCCTGGTGGTGGAGGTGCACCGGCGTGTGATGACGGAATATGTGCGGGCCATTATGAGGGGCAGAATCATCTGCACTTCTCTCAAAATGAGGAAGAGGATGGCTGGACGCCTTCGGGATGAAGGAAAGCACCTAAAAACACTCTTCAAAGAGCTGGAATCTTCAGCCTCCTGGCTCGACAGCGCTATTCCTCACCTTTCAGAGATCATTCTCTTGGAAGACACTCCCTCCATCCAGATGGAAGTTGGCGTGTTGGTACGGGAATTCCCGGACATACGAAGAAAGCACGTCTCTGCCATACTCAACATCCGCGGAATGACCCGGCAAACCGAGAGGCAGGAAATCCTGAATATAGTGAAAGACATCGAGAACAGCGACAGCGTGGCCCGAGTGTCCCGGGACAGGGCTCTGTTCGCCGAGGTGCCGGTGACGTCAGAAGTGCACTGTCTAAATCTAGGCCTGAGCCGTGTGGCCCTCACTGCCTCCAACCTCTTTTCCAGCATGCGGAGAAGAAGGACTCCGACCAGGGAAAACCACGACGATGTGCTGTAA

Function

symbol description
exoc3l2b Predicted to enable SNARE binding activity. Predicted to be involved in exocyst localization and exocytosis. Predicted to be part of exocyst. Is expressed in hindbrain; neural crest; and pharyngeal arch. Orthologous to human EXOC3L2 (exocyst complex component 3 like 2).

GO:

id name namespace
GO:0006887 exocytosis biological_process
GO:0051601 exocyst localization biological_process
GO:0000145 exocyst cellular_component
GO:0000149 SNARE binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100728-5 Predicted to enable SNARE binding activity. Predicted to be involved in exocyst localization and exocytosis. Predicted to be part of exocyst. Is expressed in hindbrain; neural crest; and pharyngeal arch. Orthologous to human EXOC3L2 (exocyst complex component 3 like 2).

Ensembl:

ensembl_id ENSDARG00000030782

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018027 False 3133 mRNA 0.52 13 20139031 20190052
TCONS_00018028 True 2586 mRNA 0.55 12 20139378 20180475

Neighbor

gene id symbol gene type direction distance location
XLOC_009160 med13b coding downstream 13700 20060643 ~ 20125331 (-)
XLOC_009159 auts2b coding downstream 114826 20004766 ~ 20024205 (-)
XLOC_009158 CR848757.1 coding downstream 206183 19929495 ~ 19932848 (-)
XLOC_009157 NA coding downstream 345420 19784491 ~ 19793611 (-)
XLOC_009156 picalmb coding downstream 366659 19726229 ~ 19772372 (-)
XLOC_009162 ppp1r14ab coding upstream 14576 20204628 ~ 20233105 (-)
XLOC_009163 AL928724.1 coding upstream 48376 20238428 ~ 20239598 (-)
XLOC_009164 NA coding upstream 63691 20253743 ~ 20281793 (-)
XLOC_009165 CR626887.3 coding upstream 149970 20340022 ~ 20381099 (-)
XLOC_009166 CR626887.2 coding upstream 154860 20344912 ~ 20345732 (-)
XLOC_009152 CU013548.1 non-coding downstream 556016 19581907 ~ 19583015 (-)
XLOC_009151 BX324151.1 non-coding downstream 596097 19542820 ~ 19542934 (-)
XLOC_009150 BX324206.1 non-coding downstream 781642 19357270 ~ 19357389 (-)
XLOC_009172 CR848784.4 non-coding upstream 608076 20798128 ~ 20799830 (-)
XLOC_009173 CR848784.5 non-coding upstream 619657 20809709 ~ 20811411 (-)

Expression


Co-expression Network