XLOC_009166 (CR626887.2)


Basic Information

Item Value
gene id XLOC_009166
gene name CR626887.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 20344912 ~ 20345732 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018032
AAACAAACTGTCCTGACGAACACAAACATTGAATCGTGTTACAGAATCCTTCACTAATCCTGCAGGAATATGAGAAAAGCTGTTTCTTCGTGTAGACTGACCTTCCTCAACTCCTGTCTCCGCTGCCTCATAATAGCTGCGAATCTTCTCAATAATCTGCTTGTCACTTTTGGTCTCTGATTTGCATGATTCACCACAACTGGCCTCTTGGAATGTCAGCTCTTCTAATTGATTTTCCTCAGTAGAGACATGCAGAGTTGGTGATACTCCCTTTGGCTCATTTGGTTGAGAAATATTTTCTTCACAGGATGGATGGCTGTCCTCGTCTTGAACTGATTCAGTTTTCTCTGCATCGGATCTTTGGACATTAATGATCGCATGTGTATTTTCATCCATCTCAGCTATAAGTGGTTTGGATTCCTCTGACTCCTGTCCTTCCAATGGCTGAACTTCTAAGGTCTCTGGAATCAACTGACACTAGAAGTAAAACAAttgaaaacactttattttagatGGGTACCTTAAGAAATGAACAGCAATATTGCTACAAAATCACTGCTGTAAATTATGTTTAcgaatagcaaaaaaaaaacattgttctgaAATACTTAAGCAATTACAGTCTCTGGATGTTGTTTGAGGTTTTATAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097067

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018032 True 650 lncRNA 0.39 2 20344912 20345732

Neighbor

gene id symbol gene type direction distance location
XLOC_009164 NA coding downstream 63119 20253743 ~ 20281793 (-)
XLOC_009163 AL928724.1 coding downstream 105314 20238428 ~ 20239598 (-)
XLOC_009162 ppp1r14ab coding downstream 111807 20204628 ~ 20233105 (-)
XLOC_009161 exoc3l2b coding downstream 154860 20139031 ~ 20190052 (-)
XLOC_009160 med13b coding downstream 219581 20060643 ~ 20125331 (-)
XLOC_009167 rnaset2l coding upstream 49577 20395309 ~ 20400438 (-)
XLOC_009168 chp2 coding upstream 60411 20406143 ~ 20412286 (-)
XLOC_009169 dlc coding upstream 117716 20463448 ~ 20468302 (-)
XLOC_009170 timm50 coding upstream 129962 20475694 ~ 20528494 (-)
XLOC_009171 tpst1 coding upstream 306954 20652686 ~ 20781116 (-)
XLOC_009158 CR848757.1 non-coding downstream 412064 19929495 ~ 19932848 (-)
XLOC_009157 NA non-coding downstream 551301 19784491 ~ 19793611 (-)
XLOC_009152 CU013548.1 non-coding downstream 761897 19581907 ~ 19583015 (-)
XLOC_009172 CR848784.4 non-coding upstream 452396 20798128 ~ 20799830 (-)
XLOC_009173 CR848784.5 non-coding upstream 463977 20809709 ~ 20811411 (-)
XLOC_009174 CR848784.2 non-coding upstream 482689 20828421 ~ 20830125 (-)
XLOC_009178 BX548078.1 non-coding upstream 614337 20960069 ~ 20978248 (-)
XLOC_009180 CR626907.2 non-coding upstream 734094 21079826 ~ 21109608 (-)

Expression


Co-expression Network