G185722


Basic Information

Item Value
gene id G185722
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3410775 ~ 3411148 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210928
CTGACTCAAGAACAAGTTCAGATGGATCTGCACTCCCCGCATGAAGAAGGGTTTCAAGAGAAGATCAAGCACCCACGTCAAAGCCGGCTATTTCACTCTCCTTCATCTCTGAATGTTTTCAGAAGCTAAGCTAAGTTCCTTTTAATGCTCATTGTTTTAAGCTATCCAGTATCGGCAACATGCTGTTGCTAAGGTTATCAGTGTTGCTTAGGCATCTAGTCATTCTCAAAAAAAAAAAAAAAAAATTTTTGTGCAAAGCTTTTGCGATCGTATTGGCAATGTGCGTTACTTATCTGTTGTCACTGGCAACTAGCTCGATCGCTGCGCATGCTGGTCGGGTTCCTTTCATTTGTATAGCAACATCATGCTGGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210928 True 374 lncRNA 0.42 1 3410775 3411148

Neighbor

gene id symbol gene type direction distance location
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 111879 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 134735 3271063 ~ 3276040 (+)
CI01000040_03212701_03215022 POU4F3 coding upstream 195607 3212701 ~ 3215168 (+)
CI01000040_03168337_03198400 RBM27 coding upstream 212375 3168337 ~ 3198400 (+)
CI01000040_02975088_02975548 NA coding upstream 434829 2975088 ~ 2975946 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 350013 3761161 ~ 3762674 (+)
CI01000040_03789687_03800746 STC2B coding downstream 377933 3789081 ~ 3800746 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 527160 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 636062 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 651799 4062947 ~ 4068198 (+)
G185707 NA non-coding upstream 32424 3377805 ~ 3378351 (+)
G185255 NA non-coding upstream 65273 3345260 ~ 3345502 (+)
G185292 NA non-coding upstream 86578 3323966 ~ 3324197 (+)
G185290 NA non-coding upstream 87522 3322853 ~ 3323253 (+)
G185287 NA non-coding upstream 92619 3317801 ~ 3318156 (+)
G185764 NA non-coding downstream 84123 3495271 ~ 3554108 (+)
G185799 NA non-coding downstream 97394 3508542 ~ 3511254 (+)
G185814 NA non-coding downstream 144924 3556072 ~ 3556361 (+)
G185818 NA non-coding downstream 150390 3561538 ~ 3640757 (+)
G185871 NA non-coding downstream 300096 3711244 ~ 3711551 (+)
G185296 NA other upstream 76792 3333578 ~ 3333983 (+)
G184003 NA other upstream 2174286 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2432612 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3133920 240849 ~ 313275 (+)
G183420 NA other upstream 3245853 157543 ~ 164922 (+)
G185884 NA other downstream 327839 3738987 ~ 3739281 (+)
G185947 NA other downstream 562617 3973765 ~ 3974123 (+)
G187510 NA other downstream 2557897 5969045 ~ 5971732 (+)
G188149 NA other downstream 3397543 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 3426976 6832987 ~ 6849135 (+)

Expression


Co-expression Network