G185296


Basic Information

Item Value
gene id G185296
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3333578 ~ 3333983 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210451
AACAAATACGTGAGAAAATTATTGAAATGTTTAAAAACAATGTTCCTCAAAGAAAGATAGGAAGACATTTGCTTATTTCACCTTCAACAGTGCATAACATAATTAAAAGATTCAAGGAATGTGGAGGAATTTCAGTGCGTAAAGGACAAGGGCGCAAGCCTAAGCTGAACAACTGTGATCTCCGATCCCTCAGGCGGCACTGCATCAAGAATCGTCATTCATCTATAAGCGATATCACCACATGGGCTCAGGACTACTTTGGCAAACCTTTGTCAAGTACCACAATACGTAGTTACATCCACAAATGCCAGTTAAAACTGTACTGTGCCAAAAGGAAGCCCTATGTTAACAGTGTCCAGAAGCGCCGTCGACTTCTCTGGGCTCGGAGGCATCTGGGATGGACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210451 True 406 TUCP 0.43 1 3333578 3333983

Neighbor

gene id symbol gene type direction distance location
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 34682 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 57538 3271063 ~ 3276040 (+)
CI01000040_03212701_03215022 POU4F3 coding upstream 118410 3212701 ~ 3215168 (+)
CI01000040_03168337_03198400 RBM27 coding upstream 135178 3168337 ~ 3198400 (+)
CI01000040_02975088_02975548 NA coding upstream 357632 2975088 ~ 2975946 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 427178 3761161 ~ 3762674 (+)
CI01000040_03789687_03800746 STC2B coding downstream 455098 3789081 ~ 3800746 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 604325 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 713227 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 728964 4062947 ~ 4068198 (+)
G185292 NA non-coding upstream 9381 3323966 ~ 3324197 (+)
G185290 NA non-coding upstream 10325 3322853 ~ 3323253 (+)
G185287 NA non-coding upstream 15422 3317801 ~ 3318156 (+)
G185175 NA non-coding upstream 183762 3125443 ~ 3149816 (+)
G185178 NA non-coding upstream 199890 3127811 ~ 3133688 (+)
G185255 NA non-coding downstream 11277 3345260 ~ 3345502 (+)
G185707 NA non-coding downstream 43822 3377805 ~ 3378351 (+)
G185722 NA non-coding downstream 76792 3410775 ~ 3411148 (+)
G185764 NA non-coding downstream 161288 3495271 ~ 3554108 (+)
G185799 NA non-coding downstream 174559 3508542 ~ 3511254 (+)
G184003 NA other upstream 2097089 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2355415 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3056723 240849 ~ 313275 (+)
G183420 NA other upstream 3168656 157543 ~ 164922 (+)
G183366 NA other upstream 3273181 53691 ~ 60397 (+)
G185884 NA other downstream 405004 3738987 ~ 3739281 (+)
G185947 NA other downstream 639782 3973765 ~ 3974123 (+)
G187510 NA other downstream 2635062 5969045 ~ 5971732 (+)
G188149 NA other downstream 3474708 6808691 ~ 6809130 (+)
CI01000040_06833701_06848731 NA other downstream 3504141 6832987 ~ 6849135 (+)

Expression


Co-expression Network