G185287


Basic Information

Item Value
gene id G185287
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3317801 ~ 3318156 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210442
ACCTTCTGTGACTTACTCTCTTTGTGGAGGGTGTCAATGATTGTCTCCTGGACCATTGCCAAGTCAGCAGTCTTCCCCATTAGTGTGGTTTCAAAGAACAAGAGATACCCGGAATTTATACTGTAGGGATGGTAATTTAATGAAACTCAAATGTAAATATTCTAATATTTTGAGATACTGGATTTTGGACTTTCATTAGCTGTACGCTCTAATCAACAAATTAAAAAAAAAAAACTTTTGAAATGTTTTACTTTACATGTAGGGAATCTAGAATATATGGAAGTTTCATTTTTTTTAAAATAATTTACAATAAAAAAATGAACTTTTTCACGATATTCTAATTATATGACCAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210442 True 356 lncRNA 0.31 1 3317801 3318156

Neighbor

gene id symbol gene type direction distance location
CI01000040_03297317_03298657 DRD1B, DRD1 coding upstream 18905 3296455 ~ 3298896 (+)
CI01000040_03271519_03276006 NA coding upstream 41761 3271063 ~ 3276040 (+)
CI01000040_03212701_03215022 POU4F3 coding upstream 102633 3212701 ~ 3215168 (+)
CI01000040_03168337_03198400 RBM27 coding upstream 119401 3168337 ~ 3198400 (+)
CI01000040_02975088_02975548 NA coding upstream 341855 2975088 ~ 2975946 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 443005 3761161 ~ 3762674 (+)
CI01000040_03789687_03800746 STC2B coding downstream 470925 3789081 ~ 3800746 (+)
CI01000040_03939728_03943493 RNF121 coding downstream 620152 3938308 ~ 3943624 (+)
CI01000040_04047210_04060876 NA coding downstream 729054 4047210 ~ 4061675 (+)
CI01000040_04063098_04068134 PPP2R2B coding downstream 744791 4062947 ~ 4068198 (+)
G185175 NA non-coding upstream 167985 3125443 ~ 3149816 (+)
G185178 NA non-coding upstream 184113 3127811 ~ 3133688 (+)
G185235 NA non-coding upstream 199333 3115093 ~ 3118468 (+)
G185171 NA non-coding upstream 271993 3045440 ~ 3045808 (+)
G185163 NA non-coding upstream 278791 3038787 ~ 3039010 (+)
G185290 NA non-coding downstream 4697 3322853 ~ 3323253 (+)
G185292 NA non-coding downstream 5810 3323966 ~ 3324197 (+)
G185255 NA non-coding downstream 27104 3345260 ~ 3345502 (+)
G185707 NA non-coding downstream 59649 3377805 ~ 3378351 (+)
G185722 NA non-coding downstream 92619 3410775 ~ 3411148 (+)
G184003 NA other upstream 2081312 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2339638 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 3040946 240849 ~ 313275 (+)
G183420 NA other upstream 3152879 157543 ~ 164922 (+)
G183366 NA other upstream 3257404 53691 ~ 60397 (+)
G185296 NA other downstream 15422 3333578 ~ 3333983 (+)
G185884 NA other downstream 420831 3738987 ~ 3739281 (+)
G185947 NA other downstream 655609 3973765 ~ 3974123 (+)
G187510 NA other downstream 2650889 5969045 ~ 5971732 (+)
G188149 NA other downstream 3490535 6808691 ~ 6809130 (+)

Expression


Co-expression Network