Gene
RNA
| Item | Value |
|---|---|
| gene id | G185171 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000040 |
| NCBI id | null |
| chromosome length | 6879596 |
| location | 3045440 ~ 3045808 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU210291 | True | 348 | lncRNA | 0.45 | 2 | 3045440 | 3045808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000040_02975088_02975548 | NA | coding | upstream | 69494 | 2975088 ~ 2975946 (+) |
| CI01000040_02889343_02891410 | KCTD16B, KCTD16 | coding | upstream | 154001 | 2889343 ~ 2891439 (+) |
| CI01000040_02650575_02692600 | NA | coding | upstream | 352769 | 2649543 ~ 2692671 (+) |
| CI01000040_02609749_02611069 | ARHGAP26 | coding | upstream | 434205 | 2609749 ~ 2611235 (+) |
| CI01000040_02602517_02603172 | NA | coding | upstream | 441817 | 2602357 ~ 2603623 (+) |
| CI01000040_03168337_03198400 | RBM27 | coding | downstream | 122529 | 3168337 ~ 3198400 (+) |
| CI01000040_03212701_03215022 | POU4F3 | coding | downstream | 166893 | 3212701 ~ 3215168 (+) |
| CI01000040_03271519_03276006 | NA | coding | downstream | 225255 | 3271063 ~ 3276040 (+) |
| CI01000040_03297317_03298657 | DRD1B, DRD1 | coding | downstream | 250647 | 3296455 ~ 3298896 (+) |
| CI01000040_03761247_03762668 | BOD1, FA44B | coding | downstream | 715353 | 3761161 ~ 3762674 (+) |
| G185163 | NA | non-coding | upstream | 6430 | 3038787 ~ 3039010 (+) |
| G185154 | NA | non-coding | upstream | 14565 | 3030662 ~ 3030875 (+) |
| G185140 | NA | non-coding | upstream | 29277 | 3015906 ~ 3016163 (+) |
| G185135 | NA | non-coding | upstream | 38099 | 3007139 ~ 3007341 (+) |
| G185101 | NA | non-coding | upstream | 62302 | 2979373 ~ 2983138 (+) |
| G185235 | NA | non-coding | downstream | 69285 | 3115093 ~ 3118468 (+) |
| G185175 | NA | non-coding | downstream | 79635 | 3125443 ~ 3149816 (+) |
| G185178 | NA | non-coding | downstream | 82003 | 3127811 ~ 3133688 (+) |
| G185287 | NA | non-coding | downstream | 271993 | 3317801 ~ 3318156 (+) |
| G185290 | NA | non-coding | downstream | 277045 | 3322853 ~ 3323253 (+) |
| G184003 | NA | other | upstream | 1808951 | 1230292 ~ 1236489 (+) |
| CI01000040_00977184_00977458 | NDUA2, NDUFA2 | other | upstream | 2067277 | 977184 ~ 978163 (+) |
| CI01000040_00240852_00305487 | GABRB2 | other | upstream | 2768585 | 240849 ~ 313275 (+) |
| G183420 | NA | other | upstream | 2880518 | 157543 ~ 164922 (+) |
| G183366 | NA | other | upstream | 2985043 | 53691 ~ 60397 (+) |
| G185296 | NA | other | downstream | 287770 | 3333578 ~ 3333983 (+) |
| G185884 | NA | other | downstream | 693179 | 3738987 ~ 3739281 (+) |
| G185947 | NA | other | downstream | 927957 | 3973765 ~ 3974123 (+) |
| G187510 | NA | other | downstream | 2923237 | 5969045 ~ 5971732 (+) |
| G188149 | NA | other | downstream | 3762883 | 6808691 ~ 6809130 (+) |
