CI01000040_02609749_02611069 (ARHGAP26)


Basic Information

Item Value
gene id CI01000040_02609749_02611069
gene name ARHGAP26
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 2609749 ~ 2611235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000040_02609749_02611069.mRNA
ATGAAATCCCCGCATCGTTGTGACATCATCGCTCATGACCATCCAACCAATCACGTTCTTCCCCTGTCGCATACAAAGCGTGCGTACCGCGTTCACAGCCCGCTTCGGAATCCCGCGACACTATTGGCCGAAAGACATGACAATCACAGGATTATCCGCTTCATGGTAGCTGGAGCAAGTATGGGATTGCCTGCGTTAGAGTTCAGCGACTGCTATTTGGACAGCCCGCAATTCCGAGAGAGGCTGAAGTCTCATGAAATGGAATTAGAGAAGACCAATAAGTTCATCAAGGAGCTGATCAAGGATGGGAAAGCTTTAATTCAAGCCCTGAAAATTACATACCCGCCTGAAATTTCCACTCCACTCCCCATTACCTTTCAAAACAAACACACTGACACTGCAGAACGAGCGCTTTCTAGAACTTACATCCAGTTGGAATTGATATCAAACCAGCTCTCTGTGTTGACCCAAGAGACATGTCCTAAGACGTAAGGTGTTGAACACAATACTGAGGTGTGTCACAGCTCAAAAATTTGACAGCTGTAAATTCCTGATGGTTTGTTATATAAAGTTGTATAACTGGAAAAAGCCTCCTCTTTGATGTGGTTTCTAATACTGAATCATCAGTTTTAATGACATTTGTCAGAGAAAATCCTGA

Function

symbol description
arhgap26 Enables phospholipid binding activity. Predicted to be involved in regulation of small GTPase mediated signal transduction. Predicted to be located in cytosol. Implicated in juvenile myelomonocytic leukemia.

GO:

id name namespace
GO:0005856 cytoskeleton cellular_component

KEGG:

id description
K20071 ARHGAP26, GRAF; Rho GTPase-activating protein 26

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000040_02609749_02611069.mRNA True 658 mRNA 0.44 3 2609749 2611235

Neighbor

gene id symbol gene type direction distance location
CI01000040_02602517_02603172 NA coding upstream 6126 2602357 ~ 2603623 (+)
CI01000040_02558495_02563310 NA coding upstream 46203 2558383 ~ 2563546 (+)
CI01000040_02475489_02482435 NA coding upstream 127234 2475489 ~ 2482515 (+)
CI01000040_02444252_02460962 NA coding upstream 148787 2443561 ~ 2460962 (+)
CI01000040_02315449_02344137 GABRQ, GABRB4 coding upstream 265436 2315449 ~ 2344313 (+)
CI01000040_02650575_02692600 NA coding downstream 38308 2649543 ~ 2692671 (+)
CI01000040_02889343_02891410 KCTD16B, KCTD16 coding downstream 278108 2889343 ~ 2891439 (+)
CI01000040_02975088_02975548 NA coding downstream 363853 2975088 ~ 2975946 (+)
CI01000040_03168337_03198400 RBM27 coding downstream 557102 3168337 ~ 3198400 (+)
CI01000040_03212701_03215022 POU4F3 coding downstream 601466 3212701 ~ 3215168 (+)
G185029 NA non-coding upstream 9097 2600430 ~ 2600652 (+)
G185028 NA non-coding upstream 10812 2598521 ~ 2598937 (+)
G184989 NA non-coding upstream 66617 2542805 ~ 2543132 (+)
G184987 NA non-coding upstream 68338 2541171 ~ 2541411 (+)
G185084 NA non-coding downstream 193028 2804263 ~ 2804512 (+)
G185105 NA non-coding downstream 219031 2830266 ~ 2830567 (+)
G185110 NA non-coding downstream 223166 2834401 ~ 2834638 (+)
G185114 NA non-coding downstream 235855 2847090 ~ 2847351 (+)
G185115 NA non-coding downstream 236597 2847832 ~ 2848524 (+)
G184003 NA other upstream 1373260 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 1631586 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2332894 240849 ~ 313275 (+)
G183420 NA other upstream 2444827 157543 ~ 164922 (+)
G183366 NA other upstream 2549352 53691 ~ 60397 (+)
G185296 NA other downstream 722343 3333578 ~ 3333983 (+)
G185884 NA other downstream 1127752 3738987 ~ 3739281 (+)
G185947 NA other downstream 1362530 3973765 ~ 3974123 (+)
G187510 NA other downstream 3357810 5969045 ~ 5971732 (+)
G188149 NA other downstream 4197456 6808691 ~ 6809130 (+)

Expression


Co-expression Network