G185084


Basic Information

Item Value
gene id G185084
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 2804263 ~ 2804512 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210190
ACTTTCTCTCGATTTCTCTCAACATGGCGACAGGAGAGCTGTCAGTCAATATATGGGAAAGCAAAGTAACTTGCATTACTCATTTTAAAAAGTAACTGAGATATTTTGTTGTAAATTTCAAAGTAATGCATTACTTTACTAGTTACTTGAAAAAAGTAATCTGATTACGTAACTCAAGTTACTTGTAATGCATTACCCCCAACATTGGATAAGACAATAAACCAATGAAAACATGAAACATGAACAAGAG

Function

NR:

description
PREDICTED: actin, alpha skeletal muscle

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210190 True 250 lncRNA 0.32 1 2804263 2804512

Neighbor

gene id symbol gene type direction distance location
CI01000040_02650575_02692600 NA coding upstream 111592 2649543 ~ 2692671 (+)
CI01000040_02609749_02611069 ARHGAP26 coding upstream 193028 2609749 ~ 2611235 (+)
CI01000040_02602517_02603172 NA coding upstream 200640 2602357 ~ 2603623 (+)
CI01000040_02558495_02563310 NA coding upstream 240717 2558383 ~ 2563546 (+)
CI01000040_02475489_02482435 NA coding upstream 321748 2475489 ~ 2482515 (+)
CI01000040_02889343_02891410 KCTD16B, KCTD16 coding downstream 84831 2889343 ~ 2891439 (+)
CI01000040_02975088_02975548 NA coding downstream 170576 2975088 ~ 2975946 (+)
CI01000040_03168337_03198400 RBM27 coding downstream 363825 3168337 ~ 3198400 (+)
CI01000040_03212701_03215022 POU4F3 coding downstream 408189 3212701 ~ 3215168 (+)
CI01000040_03271519_03276006 NA coding downstream 466551 3271063 ~ 3276040 (+)
G185029 NA non-coding upstream 203611 2600430 ~ 2600652 (+)
G185028 NA non-coding upstream 205326 2598521 ~ 2598937 (+)
G184989 NA non-coding upstream 261131 2542805 ~ 2543132 (+)
G184987 NA non-coding upstream 262852 2541171 ~ 2541411 (+)
G185105 NA non-coding downstream 25754 2830266 ~ 2830567 (+)
G185110 NA non-coding downstream 29889 2834401 ~ 2834638 (+)
G185114 NA non-coding downstream 42578 2847090 ~ 2847351 (+)
G185115 NA non-coding downstream 43320 2847832 ~ 2848524 (+)
G185116 NA non-coding downstream 44040 2848552 ~ 2848817 (+)
G184003 NA other upstream 1567774 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 1826100 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2527408 240849 ~ 313275 (+)
G183420 NA other upstream 2639341 157543 ~ 164922 (+)
G183366 NA other upstream 2743866 53691 ~ 60397 (+)
G185296 NA other downstream 529066 3333578 ~ 3333983 (+)
G185884 NA other downstream 934475 3738987 ~ 3739281 (+)
G185947 NA other downstream 1169253 3973765 ~ 3974123 (+)
G187510 NA other downstream 3164533 5969045 ~ 5971732 (+)
G188149 NA other downstream 4004179 6808691 ~ 6809130 (+)

Expression


Co-expression Network