G185154


Basic Information

Item Value
gene id G185154
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 3030662 ~ 3030875 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU210272
AAATGCAGTAAGTCTCATTCCCTGTTCTCAGGGAACCATGGTTACACACGTAACCTGAGACGTTTCCTGGCTTCACAGGTTAACAGTCTGGTGGAATTTTCTTTAAAATTAGCTTTTCACCAGTTTTGACCTTTAACTTCTACAGTAGCATATACCATTGGGCCAATAAATAGTTCACCCAAAGAAAATTAAAATTCTGTCATCATTTATTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210272 True 214 lncRNA 0.38 1 3030662 3030875

Neighbor

gene id symbol gene type direction distance location
CI01000040_02975088_02975548 NA coding upstream 54716 2975088 ~ 2975946 (+)
CI01000040_02889343_02891410 KCTD16B, KCTD16 coding upstream 139223 2889343 ~ 2891439 (+)
CI01000040_02650575_02692600 NA coding upstream 337991 2649543 ~ 2692671 (+)
CI01000040_02609749_02611069 ARHGAP26 coding upstream 419427 2609749 ~ 2611235 (+)
CI01000040_02602517_02603172 NA coding upstream 427039 2602357 ~ 2603623 (+)
CI01000040_03168337_03198400 RBM27 coding downstream 137462 3168337 ~ 3198400 (+)
CI01000040_03212701_03215022 POU4F3 coding downstream 181826 3212701 ~ 3215168 (+)
CI01000040_03271519_03276006 NA coding downstream 240188 3271063 ~ 3276040 (+)
CI01000040_03297317_03298657 DRD1B, DRD1 coding downstream 265580 3296455 ~ 3298896 (+)
CI01000040_03761247_03762668 BOD1, FA44B coding downstream 730286 3761161 ~ 3762674 (+)
G185140 NA non-coding upstream 14499 3015906 ~ 3016163 (+)
G185135 NA non-coding upstream 23321 3007139 ~ 3007341 (+)
G185101 NA non-coding upstream 47524 2979373 ~ 2983138 (+)
G185103 NA non-coding upstream 52758 2977121 ~ 2977904 (+)
G185124 NA non-coding upstream 142987 2887451 ~ 2887675 (+)
G185163 NA non-coding downstream 7912 3038787 ~ 3039010 (+)
G185171 NA non-coding downstream 14565 3045440 ~ 3045808 (+)
G185235 NA non-coding downstream 84218 3115093 ~ 3118468 (+)
G185175 NA non-coding downstream 94568 3125443 ~ 3149816 (+)
G185178 NA non-coding downstream 96936 3127811 ~ 3133688 (+)
G184003 NA other upstream 1794173 1230292 ~ 1236489 (+)
CI01000040_00977184_00977458 NDUA2, NDUFA2 other upstream 2052499 977184 ~ 978163 (+)
CI01000040_00240852_00305487 GABRB2 other upstream 2753807 240849 ~ 313275 (+)
G183420 NA other upstream 2865740 157543 ~ 164922 (+)
G183366 NA other upstream 2970265 53691 ~ 60397 (+)
G185296 NA other downstream 302703 3333578 ~ 3333983 (+)
G185884 NA other downstream 708112 3738987 ~ 3739281 (+)
G185947 NA other downstream 942890 3973765 ~ 3974123 (+)
G187510 NA other downstream 2938170 5969045 ~ 5971732 (+)
G188149 NA other downstream 3777816 6808691 ~ 6809130 (+)

Expression


Co-expression Network