G187788


Basic Information

Item Value
gene id G187788
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000040
NCBI id null
chromosome length 6879596
location 6639393 ~ 6639610 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU213251
ACAAGTCAAGTCACCTTTATTTATATAGCGCTTTTTACAATGTAGATTGTGTCAAAGCAGCTTTACATTGATAACTGGTACATTATTTGGCTGCACAGCAGCTCTTAAAAGAATAGTGTCAATGCAGGCAGATCAAAGCACTGTTGAATATCAAATGTCAAGTCAAATGTCAAGTGTCCCCAACTAAGCAAGCCAAAGGCGACAGCGGCAAGGAACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213251 True 218 lncRNA 0.40 1 6639393 6639610

Neighbor

gene id symbol gene type direction distance location
CI01000040_06514889_06518461 NA coding upstream 120663 6514889 ~ 6518730 (+)
CI01000040_06461477_06485579 POF1B coding upstream 153229 6461385 ~ 6486164 (+)
CI01000040_06433752_06454833 SLC25A14 coding upstream 184515 6433752 ~ 6454878 (+)
CI01000040_06432700_06433513 NA coding upstream 205742 6432383 ~ 6433651 (+)
CI01000040_06377128_06414371 SIAH2L, SIAH2 coding upstream 225022 6377128 ~ 6414371 (+)
CI01000040_06707788_06710457 NA coding downstream 68178 6707788 ~ 6711590 (+)
CI01000040_06787406_06804047 NA coding downstream 147796 6787406 ~ 6804084 (+)
CI01000040_06833701_06848731 NA coding downstream 193377 6832987 ~ 6849135 (+)
G187743 NA non-coding upstream 86020 6553106 ~ 6553373 (+)
G187718 NA non-coding upstream 134335 6504387 ~ 6505058 (+)
G187716 NA non-coding upstream 137845 6501226 ~ 6501548 (+)
G187507 NA non-coding upstream 215459 6420996 ~ 6423934 (+)
G187702 NA non-coding upstream 335411 6303694 ~ 6303982 (+)
G188102 NA non-coding downstream 9497 6649107 ~ 6649339 (+)
G188156 NA non-coding downstream 47700 6687310 ~ 6687582 (+)
G188152 NA non-coding downstream 121224 6760834 ~ 6764506 (+)
G188192 NA non-coding downstream 170775 6810385 ~ 6810799 (+)
G188195 NA non-coding downstream 182027 6821637 ~ 6821892 (+)
G187510 NA other upstream 667661 5969045 ~ 5971732 (+)
G185947 NA other upstream 2665270 3973765 ~ 3974123 (+)
G185884 NA other upstream 2900112 3738987 ~ 3739281 (+)
G185296 NA other upstream 3305410 3333578 ~ 3333983 (+)
G184003 NA other upstream 5402904 1230292 ~ 1236489 (+)
G188149 NA other downstream 169081 6808691 ~ 6809130 (+)

Expression


Co-expression Network