CI01000046_02027256_02031337 (RMI2)


Basic Information

Item Value
gene id CI01000046_02027256_02031337
gene name RMI2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 2027154 ~ 2031451 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_02027256_02031337.mRNA
ATATAAAATACTCTGAGCCTTTATTTTGAAACAAAGTCGTCACGTCCGGTTCGTTCATTTCACAAATGAAAAAATAGCGCGATATATGCAGCAGCACAGAAGATGATGGGAACAAGCTTTCTGTCTTCAGAAAAAACTCGAAGTCCTCCAGTGAAAGTGTTATCCAGCCAGCTGCGTGAAGGGAAAGAGTGCCACACATCAACCGGAAGACCAGAGTATGTTATTAACCGACTGGGACCCGGCGAACAGAGCACGTTACAGGTGTCAGTGGTCTGGATGCAGGGGACAGTGCTGGAGGTGCACACCGATCACAACACGGTGCTCATCCTGGACGAGACCGGGAACTTTCTCGTCAGCGGCGTCAACAGCGTGCCGAAAGGAAAACCCTGCCTGAGTCCAGGGAAATACGTCATGGTTATGGGTGTCATCCAGTCTCATAGTCCAGAGCCAGTGTTGCGTGCTGTGAAGATGGCAGATCTTTCTGAAAATGCATTGATTCACCGGAAAAACTGGATCTATGAAGTAGAAGATCTCCAGCAGATTTTGCCCTAAATCTTTTATCACTGATGTGTTTTCTTTGTGCTCTCACAATATTTGCGAAGCAAATTGAGGGAGAAAATAGAACTTACAAGACCTGCACACGACAAGTGTTTTAAGTGAGAAAGC

Function

symbol description
rmi2 Predicted to be involved in DNA metabolic process; negative regulation of double-strand break repair via homologous recombination; and regulation of sister chromatid segregation. Predicted to be active in cytosol and nuclear speck. Orthologous to human RMI2 (RecQ mediated genome instability 2).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_02027256_02031337.mRNA True 666 mRNA 0.46 2 2027154 2031451

Neighbor

gene id symbol gene type direction distance location
CI01000046_02006028_02024639 NA coding upstream 2214 2006028 ~ 2024940 (+)
CI01000046_01988070_01995034 UBFD1 coding upstream 31824 1986320 ~ 1995330 (+)
CI01000046_01963803_01965901 NA coding upstream 60102 1963555 ~ 1968371 (+)
CI01000046_01933932_01935589 NA coding upstream 89332 1932890 ~ 1937822 (+)
CI01000046_01903950_01922429 KDM8 coding upstream 104715 1902090 ~ 1922439 (+)
CI01000046_02037519_02037782 SNN, CP075, SNN.S, SNN.L coding downstream 6068 2037421 ~ 2039716 (+)
CI01000046_02066859_02072868 NA coding downstream 35408 2066859 ~ 2073014 (+)
CI01000046_02123765_02158243 AXIN1 coding downstream 92314 2123765 ~ 2158243 (+)
CI01000046_02264732_02268319 UNCX coding downstream 233121 2264572 ~ 2268638 (+)
CI01000046_02335530_02348525 NA coding downstream 302523 2333974 ~ 2348945 (+)
G195978 NA non-coding upstream 28060 1997123 ~ 1999094 (+)
G196051 NA non-coding upstream 64622 1962246 ~ 1962532 (+)
G196050 NA non-coding upstream 65395 1961219 ~ 1961759 (+)
CI01000046_01865451_01881353 NA non-coding upstream 68006 1865451 ~ 1881369 (+)
G195981 NA non-coding downstream 24619 2056070 ~ 2057016 (+)
G196076 NA non-coding downstream 46671 2078122 ~ 2078480 (+)
G196080 NA non-coding downstream 51234 2082685 ~ 2083646 (+)
G196085 NA non-coding downstream 55358 2086809 ~ 2087131 (+)
CI01000046_01540075_01668012 HS3ST4 other upstream 463817 1539494 ~ 1668012 (+)
G195003 NA other upstream 865464 1161157 ~ 1161690 (+)
G194721 NA other upstream 1566809 458008 ~ 460345 (+)
CI01000046_02451052_02454565 MAFK other downstream 408466 2442395 ~ 2457280 (+)
G196936 NA other downstream 1155544 3186995 ~ 3194271 (+)
CI01000046_03943890_03945302 ATP5J2 other downstream 1912377 3943794 ~ 3945500 (+)
G197055 NA other downstream 2117972 4149423 ~ 4149780 (+)
G197121 NA other downstream 2339560 4371011 ~ 4371430 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026700 rmi2 coding NC_007114.7 CM002887.2 43828545 ~ 43835055 (-)