G197121


Basic Information

Item Value
gene id G197121
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4371011 ~ 4371430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223789
ACATGTTTACCATAGCTCTCTCTGTCAGCGACGAGGGATTTACATGTCATAAATGTAGGGAAATAGTCAGGCTGACAGAGAGAATCTCAGAATTAGAGACACGCATCCAAACTTTAATCGAGGATAGTAAGAATGCAAGGGCTTCAGATACTGTTTTGGATGCGACTAGCTTAGTGAACTCTGTACATTGTTCGGTTCCGGCTGTAGAGCCCGCGCAGCAGGGCACTTGGGTAACGGTGAGGCGGCCTAGCCGCGGAAAACACCACTCTTCCATTCCAATAAGAACATCAAACAGGTTCTCCCCACTCAGTGATACACCCACTGAGAATCCTGTTGAAAGTGCCCTAGTTATTGGCGATTCTATTACACGGAACGTGAAAATAGAGACACCAGCCACCATAGTCACATGTTTGCCGGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223789 True 420 TUCP 0.47 1 4371011 4371430

Neighbor

gene id symbol gene type direction distance location
CI01000046_04319601_04326459 NA coding upstream 44479 4319601 ~ 4326532 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding upstream 53041 4308380 ~ 4317970 (+)
CI01000046_04274035_04275654 B9D1 coding upstream 95249 4273852 ~ 4275762 (+)
CI01000046_04098044_04120141 LLGL1 coding upstream 250659 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 287476 4081721 ~ 4083535 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 107517 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 161223 4532653 ~ 4542785 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding downstream 174530 4545960 ~ 4558453 (+)
CI01000046_04563154_04565515 NA coding downstream 191657 4563087 ~ 4565727 (+)
CI01000046_04579543_04581492 NA coding downstream 207851 4579281 ~ 4581540 (+)
G197119 NA non-coding upstream 1809 4368956 ~ 4369202 (+)
G197115 NA non-coding upstream 10511 4360222 ~ 4360500 (+)
G197114 NA non-coding upstream 11324 4359289 ~ 4359687 (+)
G197113 NA non-coding upstream 12211 4358500 ~ 4358800 (+)
G197112 NA non-coding upstream 12530 4357157 ~ 4358481 (+)
G197124 NA non-coding downstream 2852 4374282 ~ 4379788 (+)
G197125 NA non-coding downstream 10848 4382278 ~ 4382492 (+)
G197130 NA non-coding downstream 26088 4397518 ~ 4397830 (+)
G197135 NA non-coding downstream 41432 4412862 ~ 4413349 (+)
G197136 NA non-coding downstream 50306 4421736 ~ 4421959 (+)
G197055 NA other upstream 221231 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 425511 3943794 ~ 3945500 (+)
G196936 NA other upstream 1176740 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1913731 2442395 ~ 2457280 (+)
CI01000046_01865451_01881353 NA other upstream 2411863 1865451 ~ 1881369 (+)
G196869 NA other downstream 44100 4415530 ~ 4421687 (+)
G197352 NA other downstream 902952 5259318 ~ 5276453 (+)
G197528 NA other downstream 1354691 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2448508 6808507 ~ 6821543 (+)

Expression


Co-expression Network