G197130


Basic Information

Item Value
gene id G197130
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4397518 ~ 4397830 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223800
ATCCTGTTGTGGTTGGATAATGGGAGGAAGAGAGAGTATTTAAACTCCAGATATCATCGGAGCAGTGTTGGTGGTAGCTAAATTGTGTGAAGCAGCTGAGGTCTTATCTTCAACCCCAGACTTGATGTTGTTTTAAAACAAGTAGTTTGGTGTACTGATGCAAAGTCCACTTCATTTCCGTGAACTGGTTCTTTTTGGACAGTTCGGCTCAATGAACCGGTTCAAATAGCCGATTCATAGGTTCCTGCGTCATCATGCAATGATGTCAATATGCTTTTCTTTTCAAAGAACTCAGTGTCATGTTATATCAAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223800 True 313 lncRNA 0.41 1 4397518 4397830

Neighbor

gene id symbol gene type direction distance location
CI01000046_04319601_04326459 NA coding upstream 70986 4319601 ~ 4326532 (+)
CI01000046_04308380_04317709 GRAP, GRAPA coding upstream 79548 4308380 ~ 4317970 (+)
CI01000046_04274035_04275654 B9D1 coding upstream 121756 4273852 ~ 4275762 (+)
CI01000046_04098044_04120141 LLGL1 coding upstream 277166 4096231 ~ 4120352 (+)
CI01000046_04081845_04083512 NA coding upstream 313983 4081721 ~ 4083535 (+)
CI01000046_04478947_04510165 ARHGAP23A coding downstream 81117 4478947 ~ 4511125 (+)
CI01000046_04532653_04542785 PLCD3, PLCD3A coding downstream 134823 4532653 ~ 4542785 (+)
CI01000046_04545960_04557955 NMT1A, NMT1 coding downstream 148130 4545960 ~ 4558453 (+)
CI01000046_04563154_04565515 NA coding downstream 165257 4563087 ~ 4565727 (+)
CI01000046_04579543_04581492 NA coding downstream 181451 4579281 ~ 4581540 (+)
G197125 NA non-coding upstream 15026 4382278 ~ 4382492 (+)
G197124 NA non-coding upstream 17730 4374282 ~ 4379788 (+)
G197119 NA non-coding upstream 28316 4368956 ~ 4369202 (+)
G197115 NA non-coding upstream 37018 4360222 ~ 4360500 (+)
G197114 NA non-coding upstream 37831 4359289 ~ 4359687 (+)
G197135 NA non-coding downstream 15032 4412862 ~ 4413349 (+)
G197136 NA non-coding downstream 23906 4421736 ~ 4421959 (+)
G197140 NA non-coding downstream 38048 4435878 ~ 4436252 (+)
G196889 NA non-coding downstream 39407 4437237 ~ 4443882 (+)
G197153 NA non-coding downstream 243351 4641181 ~ 4643913 (+)
G197121 NA other upstream 26088 4371011 ~ 4371430 (+)
G197055 NA other upstream 247738 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 452018 3943794 ~ 3945500 (+)
G196936 NA other upstream 1203247 3186995 ~ 3194271 (+)
CI01000046_02451052_02454565 MAFK other upstream 1940238 2442395 ~ 2457280 (+)
G196869 NA other downstream 17700 4415530 ~ 4421687 (+)
G197352 NA other downstream 876552 5259318 ~ 5276453 (+)
G197528 NA other downstream 1328291 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 2422108 6808507 ~ 6821543 (+)

Expression


Co-expression Network