CI01000046_04861221_04879259 (MPP3A, MPP3)


Basic Information

Item Value
gene id CI01000046_04861221_04879259
gene name MPP3A, MPP3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4861221 ~ 4880669 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_04861221_04879259.mRNA
ATGAGCACATTGCTCAGTCTTGACATGTCCATCTGCATCAGCATTCATTCTAGACTGTCAGCAGGGTTGCATGAGACGCTTGCCCTGCTGACCTCACAGCTGCGTCCAGATGCCAATCACAAAGAGGACATGGTCTTCCTCAAGGATGTCTTCAGTGAGAGGAGTCTCAGCTACCTGATGAAGATCCATGAGAAGTTGCGTCAATATGAAAGGCAGAGCCCCACCCCAGTTCTCCACAGTGCCTCCACTCTGGCAGAGGACGTGGCAGAAGAGTTGCAAAGTGGACCGATGAGTGTTGAGGAAAAAGAACTTCTACATTTACTGACATCACCTCATCTCAAGGCGGTTTTGTCAGTTCATGACACAGTGGCGCAGAAGAATTTTGACCCTGTGCTGCCTCCTCTTCCCGACGACTTTGAGGATGAACTAGATGAGGACTCTGTCAAGATCGTCCGCCTAGTTAAAAACAAAGAGCCACTGGGTGCCACTATTCGGCGGGATGAATCCACGGGGGCCGTGATTGTGGCTCGGATCATGAAGGGAGGGGCTGCAGACAGGAGTGGTCTGGTGCATGTCGGTGATGAACTGAGAGAAGTCAACGGCAGCTCTGTAATGCACAAGAGACCAGATGAGATCAGTCAACTACTGTCTCAATCACAAGGCTCTATCACACTGAAGATCATCCCAGCAATCAAAGAGGAGGACAAGCTGAAAGAGAGCAAGGTCTACATGCGGGCACTGTTTGATTACACTCCATTGGAGGACAAAGCCACGCCGTGTCAGGAGGCAGGGCTTCCGTTTAAACGTGGAGACGTCCTGCAGGTGGTCAGTCAGGATGATCAGAGGTGGTGGCAGGCCAAGAGAGTGGGAGATTGCAGCCTACGTGCAGGACTCATCCCATCCAAACAGTTTCAGGAGAGGCGGTTAGCCTACAGAATAAAAATGGGCACTCTTCAAAACTCCAAGTCTCCCAAAAAAACTGTCTATGACCAGGGATGTGATAAAGCCGGTTTAAGGAGAAGTTTCCGTCTAAGTCGGAAGGACCGTCGTGGTTCTTCAGGAGAGGCCAATGTTACTGACCAGAATGACACAGAGTTCCTGACCTATGAAGAAGTGACACGTTACCAGCAGAGGCCCAATGAGAGACCCCGATTAGTAGTTCTCATTGGTTCTCTGGGAGCACGCATCAATGAGCTGAAGCAAAAGGTCATTGCAGAAAATCCCCATCGCTACGCCGTGGCTGTGCCTCACACCACACGGCCCAAAAAGAGCCACGAGAAGGAGGGAGTGGAGTACCACTTTGTGACTAAGCAGGCCTTTGATACAGATGCACAGAATAACAAATTTATAGAGTATGGAGAGTATAAGGAGAATCTTTATGGGACCAGTATAGAGGCCATCCGCTCTGTTCAAGCCAAGAACAAGATGTGTCTGGTAGACGTACAGCCTGAGGCTCTGAAGGCCCTGCGGACAGCCGAATTCAAGCCTTATGTCATATTTGTAAAACCACGAATCCCAGAGAGTCGTAGACGCCGCAGTGCCGGCACCTCGCCGGGAGGAGGTGAACATGGCCGAATCACAGAGGAGGAACTGCAGGAAATGCGTCTGTCTGCGCAGCAGATAGATCAACAATATGGTCATCTAGTAGATCGGGTCCTGATTAAGGAGGACACTGCCAGTGCCTGCACAGAACTACGTAGCATCCTGGAGAGACTGGAGCGGGAGACCTTCTGGGTTCCTATGAGCTGGGTCAAGGCCTAGGACCCCCCGTTAGCTTCATTCCAGACTGTTGACCAACACTTCCACTGAAGGCTTCTTTTCTACCATACGGTGCAGTCGGACTGCACACGTTCTCCTTGGCCTGGCTTCTTTCAGCCATCCACCATCCATAAGGGAATGTAGAGGTCTGCACAAGATGGATTTTTCAATCCCACTCCCGCCCAAAATGTGTTATATTTTATCCCGCTCCCACCCAAAACGTTCACTTTTTTTTTCCCGTTTCCGCAAACAAAAGCCCATAGGAAGAGGTCTACATGGATTTTCAGTCCCAGTATGGCTAGATTGAATTCTGTCTTGTTCTGGCTATTTTTTTTTTTTTTTACAATTTCCACACACAACGCTTCAGATCTCCAGTGACAGACTTGTGCGTGCAGTTATTAAGAGAGAATTATATTTTGCGGGAGCCAAGGAGTCATTTCTTTCTCCCGCTTTCTGCGCACATATCAGCATATCCTGATTTTGCAGAGTTAGATGCGTTATTGGGTCAAAATATTTTGTTGATCCTAGAACAACATTCCTGTCTGAATATTTAGTCCTATGTTTAGTCCCATAAGTTATCCCTAAAATCAGAGGGAAATGATAGGTGAATAACACTGATGTAGAAACACCTAACCCTGGTTGTAAGCCTAAACTTCACATAAACTAAACTTGTCCCTCAAATCTGATTGGTTGATTGGAATGTTGTTCCAGGATTAACAAAGATGTTGATCCAGGAACATGTTGTACTTGGTGAAATCAGGTTCTGCCACATATCAGTATCTTCCCTCCCGCATACACTCAGCAATTCAAAACTTGTCCCGCGCCGCACTCTGTTGCACCGGGTCCCGCAGACCTCTAGGGAAGGCATTAAGGCCATTGAGGGTGTCTGTCTTAATACAGATTTTGTTTTCAGGCTGGGACATGCAGGCACATAAGCACTTATATTGGCATGAATGATATTTTAATTTATTTTTTAATTACTTTAGTTATTTATTATTTGCCTTGTTGTGTCATAACATTTGTTTATTTGATACTTGATGGCTTCCTTTTAGGTTATTTCAAGAGTTTCAGTAGACTGTAAAGCAATACTTCAGTTATAACCAGATTATATTTTCAGAAAGGCGTTGATATTTAGTATTGAATGTGGAATATGGTTACCATAGAACTCCACATCTGGCCATAGCAAGTGGGAAATTTGCAGATTGAACTGTACATTTTTCTACAACGCACAGTAAGCCTTTCCCACGCACTCCCATGCAGAGACTCATTTAGCAACCGTAACTACTTCAGTTGAAAATCATTTGAAGTTTTAATTTCATAAAGTGTTGCCTATCAGACTTTGTTGTCTAATTTAATCACAGAAATCAGGTTCTTTTTGAAGAGCACGATTGATCAATGTTTCACAGGAAAATA

Function

symbol description
mpp3a Orthologous to human MPP3 (membrane palmitoylated protein 3).
mpp3 Predicted to enable PDZ domain binding activity.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_04861221_04879259.mRNA True 3171 mRNA 0.46 17 4861221 4880669

Neighbor

gene id symbol gene type direction distance location
CI01000046_04841558_04852685 NA coding upstream 8045 4841558 ~ 4853176 (+)
CI01000046_04811748_04819011 ZNF281A coding upstream 41853 4811610 ~ 4819368 (+)
CI01000046_04806234_04808207 NA coding upstream 52886 4805355 ~ 4808335 (+)
CI01000046_04694468_04701075 NA coding upstream 159968 4693655 ~ 4701253 (+)
CI01000046_04615766_04638586 NA coding upstream 222279 4615766 ~ 4638942 (+)
CI01000046_05279865_05281709 BAXA, BAX coding downstream 399196 5279865 ~ 5282127 (+)
CI01000046_05305482_05310465 NA coding downstream 424524 5305193 ~ 5310479 (+)
CI01000046_05315583_05316990 NA coding downstream 434516 5315185 ~ 5317089 (+)
CI01000046_05335886_05341205 GPATCH8 coding downstream 455217 5335886 ~ 5341888 (+)
CI01000046_05392316_05401559 ARF3A, ARF2B, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding downstream 511314 5391983 ~ 5402075 (+)
G197231 NA non-coding upstream 33089 4827804 ~ 4828132 (+)
G197173 NA non-coding upstream 102224 4758521 ~ 4758997 (+)
G197172 NA non-coding upstream 115115 4744862 ~ 4746106 (+)
G197170 NA non-coding upstream 116496 4736264 ~ 4744725 (+)
G197169 NA non-coding upstream 125031 4722189 ~ 4736190 (+)
G197240 NA non-coding downstream 7609 4888278 ~ 4888519 (+)
G197263 NA non-coding downstream 65283 4945952 ~ 4977657 (+)
G197303 NA non-coding downstream 143069 5023738 ~ 5024051 (+)
G197304 NA non-coding downstream 143828 5024497 ~ 5024757 (+)
G197305 NA non-coding downstream 153763 5034432 ~ 5034687 (+)
G196869 NA other upstream 439534 4415530 ~ 4421687 (+)
G197121 NA other upstream 489791 4371011 ~ 4371430 (+)
G197055 NA other upstream 711441 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 915721 3943794 ~ 3945500 (+)
G196936 NA other upstream 1666950 3186995 ~ 3194271 (+)
G197352 NA other downstream 393713 5259318 ~ 5276453 (+)
G197528 NA other downstream 845452 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1939269 6808507 ~ 6821543 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location