G197305


Basic Information

Item Value
gene id G197305
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 5034432 ~ 5034687 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU223998
TTTGCCAGGGCCCATGCTGACAAAGATGAAGACTACTGGGACTCTATACTCTGGAGTGATGAGACCAAGATAAATGTTTTTGGAACTGATGGCTTCAAAACTGTATGGTGTCGCAAAGGTGAGGAATACAAAGAAAAATGCATGGTGCCTACAGTGAAACATGGTGGTGGCAGTGTCCTTATGTGGGGCTGCATGAGTGCTGCTGGTGTCGGGGAGCTGCATTTCATTGATGGCATCATGAATTCACAGATGTACT

Function

NR:

description
uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223998 True 256 lncRNA 0.46 1 5034432 5034687

Neighbor

gene id symbol gene type direction distance location
CI01000046_04861221_04879259 MPP3A, MPP3 coding upstream 153763 4861221 ~ 4880669 (+)
CI01000046_04841558_04852685 NA coding upstream 181256 4841558 ~ 4853176 (+)
CI01000046_04811748_04819011 ZNF281A coding upstream 215064 4811610 ~ 4819368 (+)
CI01000046_04806234_04808207 NA coding upstream 226097 4805355 ~ 4808335 (+)
CI01000046_04694468_04701075 NA coding upstream 333179 4693655 ~ 4701253 (+)
CI01000046_05279865_05281709 BAXA, BAX coding downstream 245178 5279865 ~ 5282127 (+)
CI01000046_05305482_05310465 NA coding downstream 270506 5305193 ~ 5310479 (+)
CI01000046_05315583_05316990 NA coding downstream 280498 5315185 ~ 5317089 (+)
CI01000046_05335886_05341205 GPATCH8 coding downstream 301199 5335886 ~ 5341888 (+)
CI01000046_05392316_05401559 ARF3A, ARF2B, ARF1L, ARF3, ARF2, ARF1, ARF3.S, ARF5, ARF2A, ARF5.L coding downstream 357296 5391983 ~ 5402075 (+)
G197304 NA non-coding upstream 9675 5024497 ~ 5024757 (+)
G197303 NA non-coding upstream 10381 5023738 ~ 5024051 (+)
G197263 NA non-coding upstream 56775 4945952 ~ 4977657 (+)
G197240 NA non-coding upstream 145913 4888278 ~ 4888519 (+)
G197231 NA non-coding upstream 206300 4827804 ~ 4828132 (+)
G197306 NA non-coding downstream 2525 5037212 ~ 5037470 (+)
G197307 NA non-coding downstream 3457 5038144 ~ 5038471 (+)
G197308 NA non-coding downstream 7210 5041897 ~ 5042522 (+)
G197309 NA non-coding downstream 8233 5042920 ~ 5043387 (+)
G197310 NA non-coding downstream 8758 5043445 ~ 5043941 (+)
G196869 NA other upstream 612745 4415530 ~ 4421687 (+)
G197121 NA other upstream 663002 4371011 ~ 4371430 (+)
G197055 NA other upstream 884652 4149423 ~ 4149780 (+)
CI01000046_03943890_03945302 ATP5J2 other upstream 1088932 3943794 ~ 3945500 (+)
G196936 NA other upstream 1840161 3186995 ~ 3194271 (+)
G197352 NA other downstream 239695 5259318 ~ 5276453 (+)
G197528 NA other downstream 691434 5726121 ~ 5742684 (+)
CI01000046_06808895_06820945 GSPT1, ERF3B, GSPT1L other downstream 1785251 6808507 ~ 6821543 (+)

Expression


Co-expression Network