CI01000046_06685686_06699338 (GLYR1)


Basic Information

Item Value
gene id CI01000046_06685686_06699338
gene name GLYR1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6685330 ~ 6699338 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000046_06685686_06699338.mRNA
ATGGCGACCGTGCATCTCAGGATCGGGGATCTGGTTTGGGGTAAGCTTGGACGCTATCCACCTTGGCCAGGAAAGATCGTCAGTCCTCCGAAAGATCTGAAAAAGCCAAGAGGCAAAAAATGTTTCTTTGTCAAGTTTTTTGGAACTGAAGATCATGCCTGGATTAAGGTAGAGCAGCTGAAGCCGTACCACCCCCATAAAGAGGAGATGATCAAGATAAACAAAGGCAAGCGCTTCCAACAGGCTGTTGATGCAGTTGAGGAGTACCTAAAGAAGGCCAAGGGGAAAGATCAGACACACTCTGATGACAAAAGCAAGTCAGATAAAGGCCGTAAAGCAGCTAAACCAATGAAGATCATCGAAGAAGATGATGAAGACGCCTTCAAGGGTGGCTCATCGGACAAGGAACAGACTGATTCTGACCCAGAGCCATCCTCTGTACAACGGCTGGTCGCTGGAACAGTATCAGGATTCAAATGGGAGAGCAGTCCAGTAAAGGATGACCCACATTTCCATCACTTTCTGCTCAGCCAGTCTGAGAAGCCAGCTTCATCAATGGAGCCCATCACCAAACGTTTAAAGATAATCGAGGAGGACACAAGATCAACATCTATACAAGCAGCAGACAGCACAGCCATCAATGGCAGCATCACGCCTACAGACAAAAGGATAGGGTTCCTTGGACTAGGACTGATGGGAAGTGGTGTGGTTTCTAATTTGTTGAAGATGGGCCATGTTGTGACTGTTTGGAATCGCACAGCAGAAAAGTGTGATTTGTTCATCCAAGAAGGTGCCAGATTAGGTCGAACGCCTGCAGAGGTTGTGTCCATGTGCGATATCACATTTTCCTGTGTATCAGACCCAAAAGCTGCCAGAGATCTTGTGTTAGGTCCTAGTGGAGTCCTACAGGGAATCAGACCGGGCAAATGTTACGTGGAGATGTCCACTGTTGATCCAGAAACCATCACAGAGCTCTCACAGGTCATCACGTCCAGAGGTGGCAGATTCCTAGAAGCCCCAGTTTCGGGCAGCCAGCAGCTTTCCAATGACGGTATGCTGGTCATTGTTGCTGCAGGTGACCGCAGTGTTTATGAAGATTGTAGCAGCTGCTTCCAGGCAATGGGGAAGACGTCTTTCTTCATAGCAGGGGAAGCAGGAAATGCCGCAAGAATGATGTTGATCCTTAACATGGTTCAAGGCAGTTTCATGGCAACCATCGCAGAGGGATTGACCTTGGCGCAGGCCACGGGACAGTCACAACAAACATTCTTGGATATTCTTTGCCAAGGACAGATGGCAAGCACATTTGTGGACCAGAAATGCCAGAATATCTTGCAAGGCAACTTCAAACCTGATTACTACCTGAAACATATTCAGAAAGATCTGAGATTAGCCATTTCAATGGGAGATTCGGTCAATCATCCAACACCAATGGCAGCAGCTGCAAATGAGAAATCTGTAAAGGATGAATTTTTGATCACAAACAGGCTTGAGGAGCACGACGAAGATAAAAGCCACTGCATTGCCTTAATACCCATATAAGATAGATGTATTTATTTATTTTAACTCTAAAGAACACCATCTTGTCAGGTGCAATTTGGCCGTACGTTTTATTTTCTTAGGGGTTTTTTTTTTTTTTTTTTTGAGGTCCCCTGTTCAGAAGTTAATGTATTTTTGTTTTTATTGCCTTATCAGAAATGCAGTATTTTATTATTATTTTTTTTTTAATTTTAAAGTTGCTTGTGTAAGAGTAACTCGGATCCTGAAATGATTTATCATTTACAATGAAGTTAATGCTGAAAGTTATCCAATAGGTTTTGAGTCTTGACTATCATTTCTGCAGTGGAACTTCTTGTTTTCCAGCTCGACTGCTTTAAGATTTGTATCACAGCATTAAA

Function

symbol description
glyr1 Predicted to enable methylated histone binding activity. Predicted to be located in nucleus. Orthologous to human GLYR1 (glyoxylate reductase 1 homolog).

GO:

id name namespace
GO:0043883 malolactic enzyme activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000046_06685686_06699338.mRNA True 1898 mRNA 0.44 16 6685330 6699338

Neighbor

gene id symbol gene type direction distance location
CI01000046_06676701_06682877 ROGDI coding downstream 507 6675979 ~ 6684823 (-)
CI01000046_06664434_06673031 COG1 coding downstream 11795 6663560 ~ 6673535 (-)
CI01000046_06619452_06652257 GNA13, GNA13.S coding downstream 33073 6619166 ~ 6652257 (-)
CI01000046_06471554_06479199 ENGASE coding downstream 205839 6471085 ~ 6479491 (-)
CI01000046_06460451_06464009 COIL coding downstream 220995 6460451 ~ 6464335 (-)
CI01000046_06702303_06713022 PPL coding upstream 2470 6701808 ~ 6713022 (-)
CI01000046_06776591_06785540 RRN3 coding upstream 76927 6776265 ~ 6785540 (-)
CI01000046_06788374_06788841 NA coding upstream 88537 6787875 ~ 6788909 (-)
CI01000046_06832925_06846425 MYH11B, MYH11 coding upstream 132779 6832117 ~ 6846515 (-)
CI01000046_06872592_06887834 ABCC6B.2 coding upstream 173254 6872592 ~ 6887834 (-)
G199139 NA non-coding downstream 74246 6607855 ~ 6611084 (-)
G199130 NA non-coding downstream 91120 6577980 ~ 6594210 (-)
G199128 NA non-coding downstream 113309 6571716 ~ 6572021 (-)
G199126 NA non-coding downstream 115363 6569560 ~ 6569967 (-)
G199121 NA non-coding downstream 128297 6556699 ~ 6557033 (-)
G199157 NA non-coding upstream 453 6699791 ~ 6701035 (-)
G199196 NA non-coding upstream 36990 6736328 ~ 6736528 (-)
G199201 NA non-coding upstream 47622 6746960 ~ 6755212 (-)
G199209 NA non-coding upstream 65114 6764452 ~ 6767009 (-)
G199191 NA non-coding upstream 101291 6800629 ~ 6819784 (-)
G199014 NA other downstream 309924 6364178 ~ 6375406 (-)
G199054 NA other downstream 587656 6097359 ~ 6097674 (-)
G198265 NA other downstream 2885229 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 3817536 2866070 ~ 2867794 (-)
G199181 NA other upstream 127347 6826685 ~ 6830453 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location