G199139


Basic Information

Item Value
gene id G199139
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 6607855 ~ 6611084 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU226024
GAGGTGGACCGGCCAGTCCTGCAAAGCTCTGGATGCAGACGTAGACGCCAACAGCCGATGACATCCTCTGAATGCCAATCACGTCATCTTCAGCCAGCATGGGGATGTGGCTGGAGGCCACGGTGCCCAGCAGGAAGCCATAGAAACAGGAGCAGGACATGAGCCCCCAGAACTCAGTGACAAAGGTGAAGACCACAAGCACCGGGCACAGCAGCACCGTGCAAATCAGCAGAATGTAGATCTTGCGAATGGGCCTGTGATTGAGGAGCCAACCCATGGACAGACGACCTAGAATCTCAGCCACGGCCATGGCCGAGAGCATGTAGGTGGCACTGTCACGTGACACGCCTCGGCTCACGCTCAGCTCAATGACGTAGAGCTGCGGAGCGAAGAAGCCCAGTGTGGCGAAGAGGCCAAACAGTGCGTAGCAGTTGAAGCTGGCGTCCCTGAGCACAGAGAAGTCCAACAGCTTGGGCCTAGAAACCCCTGAGGTCTCCGTTAGCACTGGTAGCTCGTCTTCAACGTTTTCTCCTTCTTCTTTTTTCCTAAGTGCTTTTTTCTCTGCAGAGTCCTGCTCTGTAGATTCCTGGCCCTCGGACAGGTTGATCTGGGAGGAGGTGACAGACTGGACCCCTGAGTCCACAGAGCCAATAGAGGTATGTGTGAATTCATTCTCCAGGTCATATTTGGATTCAGGTTCTTTAAGGGGGGAAGCCTCTGGTGTGGCAGGTTTGGGTTTAATGACTATTGGCTTCAGCAAAGCCCCACAGACAATGATTGAGGCCTGCATAACCCCAATCACGATCAAGCAGTAACGCCAGCCAATCTGCTCCTTCAGCGCATTCAGAGCTGCTGGTGCGAGGGCTAGCAGGGAGAAGCATTCTCCAGTTGAGGCTATGGATGTGACGAGGGAGCGGCGCTTGCTGAAGTACTGCGACAGGATGGTGACTGTAGGCAGGAAGGTAAGGCAGTAGCCCAGGCCTGTAAATAAATAGCAAAGAGGGAGATGACAGCCACTGGTTTCTTCAACACAAGGGGCTCAGGTGCGCAAAGAACCAGGGCGCTCTCTTCCGTGGGACAAACTCGACAAAGGCTGAAAGAAAACTGTATTTAAAAGAGACAAAAAAAGAGACAGGAGAAGATCGGCAAGGTTAGGATCAGCTAATGGTGGCGGGGAGGAAGTCTTTTGAATTTTGGGGAAAGCTAGCAGTGCATCTTTTTAAAAATCTGAGAAAACAAGAGGTCATACTTTAGTTTAGGGTCCAATTCTCACTATTAACTATGACTTTTGCCTCAATTAACTCCTAATTACTGCTTCTTAATAGTCAGTAAGGTAGTTGTTAAGTTTAGGTATTGGGTAGGATTAAGGGATGTAGAAAAAGGTCATGCAGAATAAGGCATTAACATGTGCTTTATAAGTACTAATAAACAGCCAAAATATCCTAGTAATATGCATGCTAATAAGCATCTAGTTAATAGTGAGAATTAGACCCTAAACTAAAGCGTTATCCATAAGGATTATGTGCCACAATGAGTTTCAAAATTCAGATTTTGTTTATAGAAAACATCAGCCCTTTAAAACAATAAATGAAACAACATGTGGACTGATCGGCTAGAGTGTGAATATATTATTTAGTAAAAACTGGGGGAGGGGGGGCATTGTGAGATATTTTAGTGAATTACTGTCTATAGCTTTCTACAGCTTTCTTAAAAGCAGGAAATTTGAAATAAACCAAGTTCACTTTTGGATAATGTGTTTAAATCTCAATAACATCAATTTTTGTGTGTTACCACATGACGTGGGATAACAAGTCATATACCATTCACAGCACTGCTTGAATTCCCTGTCTTTGAAAAAAGTAAGTGAATAAAAAAGGCTAGAAAGAAAAAAAAAGTAATGCAATAATCACAAAAAAAAAAATCAATCTGTGAAAATGACAGAAAACATGACTATTATTTATTTAGTGATACGACAGAAAATCCTGCTCAAAAGATTGGGGTCAGTAAGATTAATTTTTTTGAAAGAAGTTTCTTATTCTCCCCAAGGCTGCATTTATTTCATCAAAAAATACTGTAAAAACAATAACCGTTTTCTATTTGAATATATTTGCAAATGTAATTCATTCCTGTGATGGCAAAGCTGAATTATTCTTCAAACAAAAAGAATGAAAAAATTAAATTGCAAATGCTATGAAAATATGTCTCTTCTTTAAAATAAAAATTAAACATAATCAGTTTTCACAATGTCATGCCACGCCACCCTGAGGAAAAACGTTTTCAGTTACACACTGCACTGGCAATAAAAAACACAATACAAATTAATTAATAAATTAGTTAATAAATTCACCTTCATTTACTTTACATATTTTGTAGGTCCCAAAATATGTATCGCACATACAAACTCGCACAGAAGGTGGATTTACCTGCAACGATTCCCATGGTGATGTACATCTCAGAGATGGATTTGGTGAAGGCCGTTGTGATTGTGCCCAGGCTAATCAGGAGTCCACCGAGCATGACGACAGGCCGGTAGCCAAAGTGGTTACTCATCACCGTGGAAAGAGGAGCTGTGGGAAAGATGCTGTTTGTTAACACTCAGACACACTGTGATATTTAAGCTCAAATTCAATTACAAACAGGGAATCTATGCACTTCCTTTTCAAAATTGTCTTAAATTATCCATTTATGGTGGTCATTTTTGGAGCAAGGGCATGAAGACAGTATCACTAGCAAGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU226024 True 2738 lncRNA 0.42 2 6607855 6611084

Neighbor

gene id symbol gene type direction distance location
CI01000046_06471554_06479199 ENGASE coding downstream 128364 6471085 ~ 6479491 (-)
CI01000046_06460451_06464009 COIL coding downstream 143520 6460451 ~ 6464335 (-)
CI01000046_06456550_06456910 NA coding downstream 150729 6454928 ~ 6457126 (-)
CI01000046_06399300_06413564 RAB11FIP4A, RAB11FIP4 coding downstream 194291 6398667 ~ 6413564 (-)
CI01000046_06349776_06359655 SUZ12A coding downstream 246587 6349245 ~ 6361268 (-)
CI01000046_06619452_06652257 GNA13, GNA13.S coding upstream 8082 6619166 ~ 6652257 (-)
CI01000046_06664434_06673031 COG1 coding upstream 52476 6663560 ~ 6673535 (-)
CI01000046_06676701_06682877 ROGDI coding upstream 64895 6675979 ~ 6684823 (-)
CI01000046_06685686_06699338 GLYR1 coding upstream 74246 6685330 ~ 6699338 (-)
CI01000046_06702303_06713022 PPL coding upstream 90724 6701808 ~ 6713022 (-)
G199130 NA non-coding downstream 13645 6577980 ~ 6594210 (-)
G199128 NA non-coding downstream 35834 6571716 ~ 6572021 (-)
G199126 NA non-coding downstream 37888 6569560 ~ 6569967 (-)
G199121 NA non-coding downstream 50822 6556699 ~ 6557033 (-)
G199119 NA non-coding downstream 53101 6554547 ~ 6554754 (-)
G199157 NA non-coding upstream 88707 6699791 ~ 6701035 (-)
G199196 NA non-coding upstream 125244 6736328 ~ 6736528 (-)
G199201 NA non-coding upstream 135876 6746960 ~ 6755212 (-)
G199209 NA non-coding upstream 153368 6764452 ~ 6767009 (-)
G199191 NA non-coding upstream 189545 6800629 ~ 6819784 (-)
G199014 NA other downstream 232449 6364178 ~ 6375406 (-)
G199054 NA other downstream 510181 6097359 ~ 6097674 (-)
G198265 NA other downstream 2807754 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 3740061 2866070 ~ 2867794 (-)
G199181 NA other upstream 215601 6826685 ~ 6830453 (-)

Expression


Co-expression Network