G198544


Basic Information

Item Value
gene id G198544
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4383983 ~ 4384495 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU225354
ATATTCTTGAGGTAACTGCTGGCCTACAGTATCTCACAGAAGTGAGTACACCCCTCACATTTTTGTAAATATTTTATTATATCTTTTCATGTGACAACACTGAAGAAATGACACTTTGCTACAATGTAAAGTAGTGAGCGTACAGCTTGTATAACAGTGTAAATTTGCTGTCCCCTCAAAATAACTCAACACACAGCCATTAATGTCTAAACCGCTGGCCACAAAAGTGAGTACACCCCTAAGTGAAAATGTCCAAATTGGGCCCAATTAGCCATTTTCTCTCCCCAGTGTCATGTGACTCATTAGTGTTACAAGGTCTCAGATGTGAATGGGGAGCAGGTGTGTTAAATTTAAAGGCACTCACACTCCACTGGAACAGTTTTTTCACAGGAACCGAATATTACACAACACCGGTCTTATTCACGCGTATGGACTATTCCCTGGCTCCTTCCATGTATTCTCCATGTGATATTCTCCTACGTCTCCAGTTACTCACCTCCTACGATTCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225354 True 513 lncRNA 0.42 1 4383983 4384495

Neighbor

gene id symbol gene type direction distance location
CI01000046_04374630_04379582 NA coding downstream 4395 4374510 ~ 4379588 (-)
CI01000046_04352237_04355463 ALDOAA, ALDOA, ALD, ALDOAB coding downstream 28492 4351849 ~ 4355491 (-)
CI01000046_04345411_04345806 NA coding downstream 38177 4345202 ~ 4345806 (-)
CI01000046_04336982_04343632 NA coding downstream 39929 4336705 ~ 4344054 (-)
CI01000046_04329752_04335164 PRPSAP2 coding downstream 48819 4328884 ~ 4335164 (-)
CI01000046_04415076_04421680 NA coding upstream 30275 4414770 ~ 4421690 (-)
CI01000046_04440916_04442340 NA coding upstream 56063 4440558 ~ 4442359 (-)
CI01000046_04640883_04644188 TMEM98 coding upstream 254738 4639233 ~ 4644521 (-)
CI01000046_04647083_04657110 NA coding upstream 262015 4646505 ~ 4657274 (-)
CI01000046_04685212_04689255 NA coding upstream 300690 4685185 ~ 4689375 (-)
G198538 NA non-coding downstream 12620 4370741 ~ 4371363 (-)
G198535 NA non-coding downstream 19490 4364201 ~ 4364493 (-)
G198533 NA non-coding downstream 24014 4359726 ~ 4359969 (-)
G198532 NA non-coding downstream 24888 4358799 ~ 4359095 (-)
G198522 NA non-coding downstream 128096 4255688 ~ 4255887 (-)
G198545 NA non-coding upstream 649 4385144 ~ 4385485 (-)
G198548 NA non-coding upstream 3414 4387909 ~ 4388141 (-)
G198550 NA non-coding upstream 5689 4390184 ~ 4390540 (-)
G198555 NA non-coding upstream 10679 4395174 ~ 4395541 (-)
G198582 NA non-coding upstream 22534 4407029 ~ 4407241 (-)
G198265 NA other downstream 583882 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 1516189 2866070 ~ 2867794 (-)
G196463 NA other downstream 2215339 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 3603690 774434 ~ 780293 (-)
G195098 NA other downstream 3707855 670736 ~ 676128 (-)
G199054 NA other upstream 1712864 6097359 ~ 6097674 (-)
G199014 NA other upstream 1979683 6364178 ~ 6375406 (-)
G199130 NA other upstream 2193485 6577980 ~ 6594210 (-)
G199181 NA other upstream 2442190 6826685 ~ 6830453 (-)

Expression


Co-expression Network