G198550


Basic Information

Item Value
gene id G198550
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000046
NCBI id null
chromosome length 7063170
location 4390184 ~ 4390540 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU225360
GATCACTTCCATGCCACACTTCACTGATGCAGTAATTTGTGCTAGGAGCAAGTCATTTGCTGTAATATGTCCTGCCGATCAAGTATTGAGTGCACAAAAGAACATACTTTAAAGAACTTTAACTTTTCTGTTTTGCAAATCCATTTTTTGATTGATTTTAGGAAATATTCTAATATTTTGAAATACTGGATTTTGGACTTTCATGAGCTGTACGCTCTAATCATAAAAATTAAAAAAAAAAAACTTTTGAAATGTTTTACTTTACATGTAGGGAATCTAGAATATATGAAAGTTTCATTTTTAAAAATAATTTATAATAAAAAAATGAACTTTTTGATGATATTCTAATTATATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU225360 True 357 lncRNA 0.27 1 4390184 4390540

Neighbor

gene id symbol gene type direction distance location
CI01000046_04374630_04379582 NA coding downstream 10596 4374510 ~ 4379588 (-)
CI01000046_04352237_04355463 ALDOAA, ALDOA, ALD, ALDOAB coding downstream 34693 4351849 ~ 4355491 (-)
CI01000046_04345411_04345806 NA coding downstream 44378 4345202 ~ 4345806 (-)
CI01000046_04336982_04343632 NA coding downstream 46130 4336705 ~ 4344054 (-)
CI01000046_04329752_04335164 PRPSAP2 coding downstream 55020 4328884 ~ 4335164 (-)
CI01000046_04415076_04421680 NA coding upstream 24230 4414770 ~ 4421690 (-)
CI01000046_04440916_04442340 NA coding upstream 50018 4440558 ~ 4442359 (-)
CI01000046_04640883_04644188 TMEM98 coding upstream 248693 4639233 ~ 4644521 (-)
CI01000046_04647083_04657110 NA coding upstream 255970 4646505 ~ 4657274 (-)
CI01000046_04685212_04689255 NA coding upstream 294645 4685185 ~ 4689375 (-)
G198548 NA non-coding downstream 2043 4387909 ~ 4388141 (-)
G198545 NA non-coding downstream 4699 4385144 ~ 4385485 (-)
G198544 NA non-coding downstream 5689 4383983 ~ 4384495 (-)
G198538 NA non-coding downstream 18821 4370741 ~ 4371363 (-)
G198535 NA non-coding downstream 25691 4364201 ~ 4364493 (-)
G198555 NA non-coding upstream 4634 4395174 ~ 4395541 (-)
G198582 NA non-coding upstream 16489 4407029 ~ 4407241 (-)
G198585 NA non-coding upstream 31554 4422094 ~ 4422298 (-)
G198579 NA non-coding upstream 41675 4432215 ~ 4433116 (-)
G198592 NA non-coding upstream 46056 4436596 ~ 4436800 (-)
G198265 NA other downstream 590083 3665243 ~ 3800101 (-)
CI01000046_02866255_02867695 MRM2, FTSJ2 other downstream 1522390 2866070 ~ 2867794 (-)
G196463 NA other downstream 2221540 2168266 ~ 2168644 (-)
CI01000046_00777923_00780186 RPC11, POLR3K, POLR3K.S other downstream 3609891 774434 ~ 780293 (-)
G195098 NA other downstream 3714056 670736 ~ 676128 (-)
G199054 NA other upstream 1706819 6097359 ~ 6097674 (-)
G199014 NA other upstream 1973638 6364178 ~ 6375406 (-)
G199130 NA other upstream 2187440 6577980 ~ 6594210 (-)
G199181 NA other upstream 2436145 6826685 ~ 6830453 (-)

Expression


Co-expression Network